Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU248726 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G209961 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 12236974 ~ 12237192 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU248715 | lncRNA | downstream | 62567 | 12173454 ~ 12174407 (-) | True | G209951 |
| TU248700 | lncRNA | downstream | 77862 | 12158070 ~ 12159112 (-) | True | G209946 |
| TU248590 | lncRNA | downstream | 101055 | 12135508 ~ 12135919 (-) | True | G209868 |
| TU248554 | lncRNA | downstream | 152272 | 12083736 ~ 12084702 (-) | True | G209835 |
| TU248558 | lncRNA | downstream | 159901 | 12076672 ~ 12077073 (-) | True | G209839 |
| TU248756 | lncRNA | upstream | 60932 | 12298124 ~ 12298977 (-) | False | LOC113528332 |
| TU248758 | lncRNA | upstream | 96262 | 12333454 ~ 12333662 (-) | True | G209984 |
| XR_004579344.1 | lncRNA | upstream | 209269 | 12446461 ~ 12463878 (-) | True | LOC117598772 |
| TU248929 | lncRNA | upstream | 349239 | 12586431 ~ 12587089 (-) | True | G210123 |
| TU249181 | lncRNA | upstream | 630398 | 12867590 ~ 12868480 (-) | True | G210351 |
| XM_026916812.2 | mRNA | downstream | 947 | 12201968 ~ 12236027 (-) | True | grid2ipa |
| XM_026916823.2 | mRNA | downstream | 36500 | 12190072 ~ 12200474 (-) | True | slc5a11 |
| XM_034310196.1 | mRNA | downstream | 39117 | 12190072 ~ 12197857 (-) | False | slc5a11 |
| XM_026916587.2 | mRNA | downstream | 83091 | 12147496 ~ 12153883 (-) | True | LOC113528185 |
| XM_026916695.2 | mRNA | downstream | 204216 | 12015201 ~ 12032758 (-) | False | tnpo2 |
| XM_026916822.2 | mRNA | upstream | 1944 | 12239136 ~ 12248090 (-) | True | e4f1 |
| XM_026916825.2 | mRNA | upstream | 13492 | 12250684 ~ 12261251 (-) | False | zgc:113333 |
| XM_026916824.2 | mRNA | upstream | 13492 | 12250684 ~ 12259495 (-) | True | zgc:113333 |
| XM_026916830.2 | mRNA | upstream | 34978 | 12272170 ~ 12278591 (-) | True | hagh |
| XM_026916831.2 | mRNA | upstream | 34978 | 12272170 ~ 12278590 (-) | False | hagh |
| XR_003402971.1 | other | downstream | 211402 | 12025502 ~ 12025572 (-) | True | LOC113528656 |
| XR_003402968.1 | other | downstream | 481051 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
| TU248329 | other | downstream | 535873 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
| XR_003402973.1 | other | downstream | 670846 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| XR_003402963.1 | other | downstream | 700296 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| TU248755 | other | upstream | 62813 | 12300005 ~ 12315469 (-) | False | LOC113528332 |
| TU248759 | other | upstream | 96666 | 12333858 ~ 12339269 (-) | True | msrb1a |
| XR_004579428.1 | other | upstream | 311637 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579425.1 | other | upstream | 311637 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579426.1 | other | upstream | 311638 | 12548830 ~ 12559213 (-) | False | tom1 |
