Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU248756 |
| length | 854 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 1 |
| gene id | LOC113528332 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 12297776 ~ 12315498 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU248726 | lncRNA | downstream | 60932 | 12236974 ~ 12237192 (-) | True | G209961 |
| TU248715 | lncRNA | downstream | 123717 | 12173454 ~ 12174407 (-) | True | G209951 |
| TU248700 | lncRNA | downstream | 139012 | 12158070 ~ 12159112 (-) | True | G209946 |
| TU248590 | lncRNA | downstream | 162205 | 12135508 ~ 12135919 (-) | True | G209868 |
| TU248554 | lncRNA | downstream | 213422 | 12083736 ~ 12084702 (-) | True | G209835 |
| TU248758 | lncRNA | upstream | 34477 | 12333454 ~ 12333662 (-) | True | G209984 |
| XR_004579344.1 | lncRNA | upstream | 147484 | 12446461 ~ 12463878 (-) | True | LOC117598772 |
| TU248929 | lncRNA | upstream | 287454 | 12586431 ~ 12587089 (-) | True | G210123 |
| TU249181 | lncRNA | upstream | 568613 | 12867590 ~ 12868480 (-) | True | G210351 |
| TU249178 | lncRNA | upstream | 570275 | 12869252 ~ 12870186 (-) | True | G210349 |
| XM_026916834.2 | mRNA | downstream | 10986 | 12280033 ~ 12287138 (-) | False | LOC113528334 |
| XM_026916833.2 | mRNA | downstream | 10986 | 12280033 ~ 12287138 (-) | True | LOC113528334 |
| XM_026916830.2 | mRNA | downstream | 19533 | 12272170 ~ 12278591 (-) | True | hagh |
| XM_026916831.2 | mRNA | downstream | 19534 | 12272170 ~ 12278590 (-) | False | hagh |
| XM_026916825.2 | mRNA | downstream | 36873 | 12250684 ~ 12261251 (-) | False | zgc:113333 |
| XM_026916839.2 | mRNA | upstream | 34877 | 12333854 ~ 12339263 (-) | False | msrb1a |
| XM_026916828.2 | mRNA | upstream | 57647 | 12356624 ~ 12363766 (-) | True | LOC113528330 |
| XM_026916835.2 | mRNA | upstream | 72556 | 12371533 ~ 12374265 (-) | True | rps2 |
| XM_026916147.2 | mRNA | upstream | 76916 | 12375893 ~ 12381034 (-) | True | si:ch211-139g16.8 |
| XM_034310198.1 | mRNA | upstream | 90729 | 12389706 ~ 12394578 (-) | False | LOC113528448 |
| XR_003402971.1 | other | downstream | 272552 | 12025502 ~ 12025572 (-) | True | LOC113528656 |
| XR_003402968.1 | other | downstream | 542201 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
| TU248329 | other | downstream | 597023 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
| XR_003402973.1 | other | downstream | 731996 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| XR_003402963.1 | other | downstream | 761446 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| TU248755 | other | upstream | 1028 | 12300005 ~ 12315469 (-) | False | LOC113528332 |
| TU248759 | other | upstream | 34881 | 12333858 ~ 12339269 (-) | True | msrb1a |
| XR_004579428.1 | other | upstream | 249852 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579425.1 | other | upstream | 249852 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579426.1 | other | upstream | 249853 | 12548830 ~ 12559213 (-) | False | tom1 |
