Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU249275 |
| length | 683 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G210412 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 13034128 ~ 13034852 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003402901.2 | lncRNA | downstream | 13450 | 12979965 ~ 13020678 (-) | True | LOC113527982 |
| TU249260 | lncRNA | downstream | 44007 | 12979970 ~ 12990121 (-) | False | LOC113527982 |
| TU249259 | lncRNA | downstream | 44095 | 12979970 ~ 12990033 (-) | False | LOC113527982 |
| XR_004579372.1 | lncRNA | downstream | 85011 | 12947310 ~ 12949117 (-) | True | LOC117598834 |
| TU249177 | lncRNA | downstream | 105320 | 12926645 ~ 12928808 (-) | True | G210348 |
| TU249295 | lncRNA | upstream | 43147 | 13077999 ~ 13078945 (-) | True | G210427 |
| TU249303 | lncRNA | upstream | 60392 | 13095244 ~ 13095477 (-) | True | G210435 |
| TU249304 | lncRNA | upstream | 60668 | 13095520 ~ 13095737 (-) | True | G210436 |
| TU249332 | lncRNA | upstream | 136989 | 13171841 ~ 13172066 (-) | True | G210461 |
| TU249463 | lncRNA | upstream | 275681 | 13310533 ~ 13354585 (-) | True | G210570 |
| XM_034309783.1 | mRNA | downstream | 421202 | 12593577 ~ 12612926 (-) | False | pik3r6b |
| XM_034309784.1 | mRNA | downstream | 424374 | 12593577 ~ 12609754 (-) | False | pik3r6b |
| XM_026916230.2 | mRNA | downstream | 424374 | 12593577 ~ 12609754 (-) | False | pik3r6b |
| XM_026916229.2 | mRNA | downstream | 424375 | 12593577 ~ 12609753 (-) | True | pik3r6b |
| XM_034309785.1 | mRNA | downstream | 428080 | 12593577 ~ 12606048 (-) | False | pik3r6b |
| XM_034309972.1 | mRNA | upstream | 12467 | 13047319 ~ 13063983 (-) | False | ilf3b |
| XM_026916474.2 | mRNA | upstream | 12467 | 13047319 ~ 13062742 (-) | True | ilf3b |
| XM_034309973.1 | mRNA | upstream | 14718 | 13049570 ~ 13062742 (-) | False | ilf3b |
| XM_026916475.2 | mRNA | upstream | 15381 | 13050233 ~ 13062742 (-) | False | ilf3b |
| XM_026917297.2 | mRNA | upstream | 61407 | 13096259 ~ 13104829 (-) | True | gcdhb |
| trnas-aga_12 | other | downstream | 207589 | 12826458 ~ 12826539 (-) | True | trnas-aga_12 |
| XR_004579428.1 | other | downstream | 474915 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579330.1 | other | upstream | 360614 | 13395466 ~ 13399225 (-) | True | LOC117598755 |
| XR_003402937.2 | other | upstream | 969317 | 14004169 ~ 14006512 (-) | False | LOC113528401 |
| XR_003402952.2 | other | upstream | 985396 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579449.1 | other | upstream | 1452969 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| TU250141 | other | upstream | 1485425 | 14520277 ~ 14520975 (-) | True | G211151 |
