Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU249525 |
| length | 480 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 1 |
| gene id | znf653 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 13435381 ~ 13445686 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU249423 | lncRNA | upstream | 78855 | 13365684 ~ 13365893 (+) | True | G210532 |
| TU249234 | lncRNA | upstream | 398915 | 13044990 ~ 13045833 (+) | True | G210384 |
| TU249018 | lncRNA | upstream | 623464 | 12821076 ~ 12821284 (+) | True | G210209 |
| TU248969 | lncRNA | upstream | 664612 | 12779249 ~ 12780136 (+) | True | G210160 |
| TU248885 | lncRNA | upstream | 896245 | 12546433 ~ 12548503 (+) | True | G210086 |
| TU249558 | lncRNA | downstream | 14752 | 13459979 ~ 13460490 (+) | True | G210655 |
| TU249616 | lncRNA | downstream | 216947 | 13662174 ~ 13663501 (+) | True | G210698 |
| TU249611 | lncRNA | downstream | 220289 | 13665516 ~ 13669551 (+) | True | G210694 |
| TU249641 | lncRNA | downstream | 250263 | 13695490 ~ 13695799 (+) | True | G210719 |
| TU249647 | lncRNA | downstream | 298222 | 13743449 ~ 13744528 (+) | True | G210725 |
| XM_026915989.2 | mRNA | upstream | 14550 | 13424701 ~ 13430198 (+) | True | epor |
| XM_026917165.2 | mRNA | upstream | 22042 | 13410944 ~ 13422706 (+) | True | rab3db |
| XM_026917166.2 | mRNA | upstream | 22042 | 13410944 ~ 13422706 (+) | False | rab3db |
| XM_026917163.2 | mRNA | upstream | 22042 | 13413431 ~ 13422706 (+) | False | rab3db |
| XM_026916150.2 | mRNA | upstream | 39822 | 13399991 ~ 13404926 (+) | True | tmem205 |
| XM_026916251.2 | mRNA | downstream | 3022 | 13448249 ~ 13458730 (+) | True | tspan35 |
| XM_034310080.1 | mRNA | downstream | 18858 | 13464085 ~ 13493942 (+) | False | zgc:158403 |
| XM_026916842.2 | mRNA | downstream | 30202 | 13475429 ~ 13493942 (+) | True | zgc:158403 |
| XM_026916841.2 | mRNA | downstream | 30601 | 13475828 ~ 13493942 (+) | False | zgc:158403 |
| XM_026916656.2 | mRNA | downstream | 72369 | 13517596 ~ 13660239 (+) | False | nfixb |
| XR_003402925.2 | other | upstream | 1256159 | 12158706 ~ 12188589 (+) | False | arhgap17b |
| XR_004579334.1 | other | upstream | 1866925 | 11567119 ~ 11577823 (+) | False | luc7l3 |
| XR_003402977.1 | other | upstream | 1907583 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
| TU247338 | other | upstream | 3026867 | 10372415 ~ 10417881 (+) | False | G208781 |
| XR_004579399.1 | other | downstream | 30601 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| trnar-ucu_8 | other | downstream | 2368015 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU251011 | other | downstream | 2472990 | 15918217 ~ 15968759 (+) | True | G211913 |
| TU251142 | other | downstream | 2695103 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251743 | other | downstream | 3642064 | 17087291 ~ 17109275 (+) | False | srl |
