Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU249813 |
| length | 382 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G210871 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 13663416 ~ 13663797 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU249798 | lncRNA | downstream | 2602 | 13628793 ~ 13660814 (-) | True | G210858 |
| TU249797 | lncRNA | downstream | 2602 | 13655034 ~ 13660814 (-) | False | G210858 |
| TU249799 | lncRNA | downstream | 25579 | 13591439 ~ 13637837 (-) | False | G210858 |
| TU249602 | lncRNA | downstream | 137836 | 13525381 ~ 13525580 (-) | True | G210690 |
| XR_003402926.2 | lncRNA | downstream | 187954 | 13463539 ~ 13475462 (-) | True | LOC113528343 |
| TU249833 | lncRNA | upstream | 59754 | 13723551 ~ 13726829 (-) | True | G210886 |
| TU249837 | lncRNA | upstream | 68622 | 13732419 ~ 13786511 (-) | True | G210888 |
| XR_003402896.2 | lncRNA | upstream | 76272 | 13740069 ~ 13747987 (-) | False | LOC113527951 |
| TU249804 | lncRNA | upstream | 76279 | 13740076 ~ 13747999 (-) | True | LOC113527951 |
| TU249820 | lncRNA | upstream | 94729 | 13758526 ~ 13824293 (-) | True | G210877 |
| XM_026916843.2 | mRNA | downstream | 165253 | 13494986 ~ 13498163 (-) | True | gadd45gip1 |
| XM_026917009.2 | mRNA | downstream | 228060 | 13432227 ~ 13435356 (-) | True | swsap1 |
| XM_026916221.2 | mRNA | downstream | 267959 | 13390616 ~ 13395457 (-) | True | elof1 |
| XM_026917193.2 | mRNA | downstream | 395242 | 13241850 ~ 13268174 (-) | True | LOC113528569 |
| XM_026917090.2 | mRNA | downstream | 436541 | 13223244 ~ 13226875 (-) | True | nfil3-6 |
| XM_026916672.2 | mRNA | upstream | 7112 | 13670909 ~ 13695259 (-) | True | xpo6 |
| XM_034309975.1 | mRNA | upstream | 32816 | 13696613 ~ 13702527 (-) | False | antkmt |
| XM_026916113.2 | mRNA | upstream | 32816 | 13696613 ~ 13702171 (-) | False | antkmt |
| XM_026916114.2 | mRNA | upstream | 32816 | 13696613 ~ 13699995 (-) | True | antkmt |
| XM_026917037.2 | mRNA | upstream | 50603 | 13714400 ~ 13715455 (-) | True | LOC113528466 |
| XR_004579330.1 | other | downstream | 264191 | 13395466 ~ 13399225 (-) | True | LOC117598755 |
| trnas-aga_12 | other | downstream | 836877 | 12826458 ~ 12826539 (-) | True | trnas-aga_12 |
| XR_004579425.1 | other | downstream | 1104203 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_003402937.2 | other | upstream | 340372 | 14004169 ~ 14006512 (-) | False | LOC113528401 |
| XR_003402952.2 | other | upstream | 356451 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579449.1 | other | upstream | 824024 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| TU250141 | other | upstream | 856480 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579411.1 | other | upstream | 1014953 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
