Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU249866 |
| length | 375 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G210915 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 13869199 ~ 13869573 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU249850 | lncRNA | downstream | 24723 | 13843036 ~ 13844476 (-) | False | xylt2 |
| TU249820 | lncRNA | downstream | 44906 | 13758526 ~ 13824293 (-) | True | G210877 |
| TU249837 | lncRNA | downstream | 82688 | 13732419 ~ 13786511 (-) | True | G210888 |
| TU249804 | lncRNA | downstream | 121200 | 13740076 ~ 13747999 (-) | True | LOC113527951 |
| XR_003402896.2 | lncRNA | downstream | 121212 | 13740069 ~ 13747987 (-) | False | LOC113527951 |
| TU249888 | lncRNA | upstream | 124423 | 13993996 ~ 14001008 (-) | False | mcrip1 |
| TU249911 | lncRNA | upstream | 265521 | 14135094 ~ 14135304 (-) | True | G210952 |
| TU249932 | lncRNA | upstream | 347100 | 14216673 ~ 14216872 (-) | True | G210973 |
| TU249956 | lncRNA | upstream | 424734 | 14294307 ~ 14298198 (-) | True | G210997 |
| TU249962 | lncRNA | upstream | 460013 | 14329586 ~ 14329920 (-) | True | G211003 |
| XM_026915996.2 | mRNA | downstream | 35314 | 13815726 ~ 13833885 (-) | False | zgc:112183 |
| XM_026915995.2 | mRNA | downstream | 36148 | 13815726 ~ 13833051 (-) | True | zgc:112183 |
| XM_026916044.2 | mRNA | downstream | 59756 | 13763895 ~ 13809443 (-) | True | LOC113527894 |
| XM_026917037.2 | mRNA | downstream | 153744 | 13714400 ~ 13715455 (-) | True | LOC113528466 |
| XM_026916113.2 | mRNA | downstream | 167028 | 13696613 ~ 13702171 (-) | False | antkmt |
| XM_026916733.2 | mRNA | upstream | 34585 | 13904158 ~ 13938439 (-) | True | recql5 |
| XM_034309881.1 | mRNA | upstream | 56829 | 13926402 ~ 13938439 (-) | False | recql5 |
| XM_026916721.2 | mRNA | upstream | 90928 | 13960501 ~ 13985023 (-) | True | arhgdia |
| XM_026916983.2 | mRNA | upstream | 117149 | 13986722 ~ 13989892 (-) | True | alyref |
| XM_026916984.2 | mRNA | upstream | 117149 | 13986722 ~ 13989890 (-) | False | alyref |
| XR_004579330.1 | other | downstream | 469974 | 13395466 ~ 13399225 (-) | True | LOC117598755 |
| trnas-aga_12 | other | downstream | 1042660 | 12826458 ~ 12826539 (-) | True | trnas-aga_12 |
| XR_004579425.1 | other | downstream | 1309986 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_003402937.2 | other | upstream | 134596 | 14004169 ~ 14006512 (-) | False | LOC113528401 |
| XR_003402952.2 | other | upstream | 150675 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579449.1 | other | upstream | 618248 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| TU250141 | other | upstream | 650704 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579411.1 | other | upstream | 809177 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
