Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU249888 |
| length | 1026 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 5 |
| gene id | mcrip1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 13993876 ~ 14001037 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU249866 | lncRNA | downstream | 124423 | 13869199 ~ 13869573 (-) | True | G210915 |
| TU249850 | lncRNA | downstream | 149520 | 13843036 ~ 13844476 (-) | False | xylt2 |
| TU249820 | lncRNA | downstream | 169703 | 13758526 ~ 13824293 (-) | True | G210877 |
| TU249837 | lncRNA | downstream | 207485 | 13732419 ~ 13786511 (-) | True | G210888 |
| TU249911 | lncRNA | upstream | 134086 | 14135094 ~ 14135304 (-) | True | G210952 |
| TU249932 | lncRNA | upstream | 215665 | 14216673 ~ 14216872 (-) | True | G210973 |
| TU249956 | lncRNA | upstream | 293299 | 14294307 ~ 14298198 (-) | True | G210997 |
| TU249962 | lncRNA | upstream | 328578 | 14329586 ~ 14329920 (-) | True | G211003 |
| TU250024 | lncRNA | upstream | 460784 | 14461792 ~ 14462409 (-) | True | G211054 |
| XM_026916983.2 | mRNA | downstream | 4104 | 13986722 ~ 13989892 (-) | True | alyref |
| XM_026916984.2 | mRNA | downstream | 4106 | 13986722 ~ 13989890 (-) | False | alyref |
| XM_026916721.2 | mRNA | downstream | 8973 | 13960501 ~ 13985023 (-) | True | arhgdia |
| XM_026916733.2 | mRNA | downstream | 55557 | 13904158 ~ 13938439 (-) | True | recql5 |
| XM_034309881.1 | mRNA | downstream | 55557 | 13926402 ~ 13938439 (-) | False | recql5 |
| XM_026916932.2 | mRNA | upstream | 3161 | 14004169 ~ 14006512 (-) | True | LOC113528401 |
| XM_026917110.2 | mRNA | upstream | 16607 | 14017615 ~ 14029641 (-) | False | pecam1 |
| XM_026917109.2 | mRNA | upstream | 16607 | 14017615 ~ 14029641 (-) | True | pecam1 |
| XM_026917236.2 | mRNA | upstream | 182529 | 14183537 ~ 14202558 (-) | True | LOC113528592 |
| XM_034310166.1 | mRNA | upstream | 378027 | 14379035 ~ 14391094 (-) | True | prpsap1 |
| XR_004579330.1 | other | downstream | 594771 | 13395466 ~ 13399225 (-) | True | LOC117598755 |
| trnas-aga_12 | other | downstream | 1167457 | 12826458 ~ 12826539 (-) | True | trnas-aga_12 |
| XR_004579425.1 | other | downstream | 1434783 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_003402937.2 | other | upstream | 3161 | 14004169 ~ 14006512 (-) | False | LOC113528401 |
| XR_003402952.2 | other | upstream | 19240 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579449.1 | other | upstream | 486813 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| TU250141 | other | upstream | 519269 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579411.1 | other | upstream | 677742 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
