Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU249956 |
| length | 281 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G210997 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 14294307 ~ 14298198 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU249932 | lncRNA | downstream | 77435 | 14216673 ~ 14216872 (-) | True | G210973 |
| TU249911 | lncRNA | downstream | 159003 | 14135094 ~ 14135304 (-) | True | G210952 |
| TU249888 | lncRNA | downstream | 293299 | 13993996 ~ 14001008 (-) | False | mcrip1 |
| TU249866 | lncRNA | downstream | 424734 | 13869199 ~ 13869573 (-) | True | G210915 |
| TU249850 | lncRNA | downstream | 449831 | 13843036 ~ 13844476 (-) | False | xylt2 |
| TU249962 | lncRNA | upstream | 31388 | 14329586 ~ 14329920 (-) | True | G211003 |
| TU250024 | lncRNA | upstream | 163594 | 14461792 ~ 14462409 (-) | True | G211054 |
| TU250187 | lncRNA | upstream | 290622 | 14588820 ~ 14594664 (-) | True | G211187 |
| TU250196 | lncRNA | upstream | 321034 | 14619232 ~ 14621782 (-) | False | G211195 |
| TU250195 | lncRNA | upstream | 321576 | 14619774 ~ 14621782 (-) | True | G211195 |
| XM_026917236.2 | mRNA | downstream | 91749 | 14183537 ~ 14202558 (-) | True | LOC113528592 |
| XM_026917110.2 | mRNA | downstream | 264666 | 14017615 ~ 14029641 (-) | False | pecam1 |
| XM_026917109.2 | mRNA | downstream | 264666 | 14017615 ~ 14029641 (-) | True | pecam1 |
| XM_026916932.2 | mRNA | downstream | 287795 | 14004169 ~ 14006512 (-) | True | LOC113528401 |
| XM_026915988.2 | mRNA | downstream | 293273 | 13993876 ~ 14001034 (-) | True | mcrip1 |
| XM_034310166.1 | mRNA | upstream | 80837 | 14379035 ~ 14391094 (-) | True | prpsap1 |
| XM_034310167.1 | mRNA | upstream | 80837 | 14379035 ~ 14391089 (-) | False | prpsap1 |
| XM_034310310.1 | mRNA | upstream | 96031 | 14394229 ~ 14410677 (-) | False | LOC113527937 |
| XM_034310309.1 | mRNA | upstream | 96031 | 14394229 ~ 14410677 (-) | False | LOC113527937 |
| XM_034310306.1 | mRNA | upstream | 96031 | 14394229 ~ 14410677 (-) | True | LOC113527937 |
| XR_003402952.2 | other | downstream | 264666 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_003402937.2 | other | downstream | 287795 | 14004169 ~ 14006512 (-) | False | LOC113528401 |
| XR_004579330.1 | other | downstream | 895082 | 13395466 ~ 13399225 (-) | True | LOC117598755 |
| trnas-aga_12 | other | downstream | 1467768 | 12826458 ~ 12826539 (-) | True | trnas-aga_12 |
| XR_004579427.1 | other | downstream | 1735094 | 12549120 ~ 12559213 (-) | False | tom1 |
| XR_004579449.1 | other | upstream | 189623 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| TU250141 | other | upstream | 222079 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579411.1 | other | upstream | 380552 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
| XR_003402969.1 | other | upstream | 1173579 | 15471777 ~ 15471912 (-) | True | LOC113528654 |
| XR_004579443.1 | other | upstream | 2994653 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
