Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU249993 |
| length | 611 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G211031 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 14432370 ~ 14433295 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko04080 | Neuroactive ligand-receptor interaction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU249968 | lncRNA | upstream | 52473 | 14378543 ~ 14379897 (+) | True | G211006 |
| TU249711 | lncRNA | upstream | 442477 | 13987875 ~ 13989893 (+) | True | G210784 |
| TU249743 | lncRNA | upstream | 504381 | 13922914 ~ 13927989 (+) | True | LOC113528277 |
| TU249744 | lncRNA | upstream | 504543 | 13922914 ~ 13927827 (+) | False | LOC113528277 |
| XR_003402923.2 | lncRNA | upstream | 504550 | 13922904 ~ 13927820 (+) | False | LOC113528277 |
| TU249994 | lncRNA | downstream | 532 | 14433827 ~ 14434055 (+) | True | G211032 |
| TU250028 | lncRNA | downstream | 33143 | 14466438 ~ 14466674 (+) | True | G211058 |
| TU250048 | lncRNA | downstream | 48518 | 14481813 ~ 14482016 (+) | True | G211076 |
| TU250078 | lncRNA | downstream | 129225 | 14562520 ~ 14563021 (+) | True | G211101 |
| TU250095 | lncRNA | downstream | 171422 | 14604717 ~ 14692759 (+) | True | G211117 |
| XM_034310176.1 | mRNA | upstream | 55921 | 14375095 ~ 14376449 (+) | True | rasd4 |
| XM_026916850.2 | mRNA | upstream | 120819 | 14229822 ~ 14311551 (+) | True | LOC113528345 |
| XM_026916216.2 | mRNA | upstream | 310056 | 14117953 ~ 14122314 (+) | True | nptx1l |
| XM_026917057.2 | mRNA | upstream | 472019 | 13945365 ~ 13960351 (+) | True | cdr2l |
| XM_026917160.2 | mRNA | upstream | 529259 | 13893471 ~ 13903111 (+) | True | si:ch211-120g10.1 |
| XM_026916062.2 | mRNA | downstream | 2541 | 14435836 ~ 14442332 (+) | False | LOC113527900 |
| XM_026916060.2 | mRNA | downstream | 2541 | 14435836 ~ 14442332 (+) | False | LOC113527900 |
| XM_026916059.2 | mRNA | downstream | 2541 | 14435836 ~ 14442331 (+) | False | LOC113527900 |
| XM_026916063.2 | mRNA | downstream | 2568 | 14435863 ~ 14442332 (+) | False | LOC113527900 |
| XM_026916064.2 | mRNA | downstream | 3003 | 14436298 ~ 14442332 (+) | False | LOC113527900 |
| XR_004579399.1 | other | upstream | 939520 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| XR_003402925.2 | other | upstream | 2243781 | 12158706 ~ 12188589 (+) | False | arhgap17b |
| XR_004579334.1 | other | upstream | 2854547 | 11567119 ~ 11577823 (+) | False | luc7l3 |
| XR_003402977.1 | other | upstream | 2895205 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
| TU247339 | other | upstream | 4014489 | 10412984 ~ 10417881 (+) | True | G208781 |
| trnar-ucu_8 | other | downstream | 1379947 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU251011 | other | downstream | 1484922 | 15918217 ~ 15968759 (+) | True | G211913 |
| TU251142 | other | downstream | 1707035 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251743 | other | downstream | 2653996 | 17087291 ~ 17109275 (+) | False | srl |
| XR_004579361.1 | other | downstream | 3750724 | 18184019 ~ 18341937 (+) | True | LOC113528485 |
