Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU250078 |
| length | 451 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G211101 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 14562520 ~ 14563021 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU250048 | lncRNA | upstream | 80504 | 14481813 ~ 14482016 (+) | True | G211076 |
| TU250028 | lncRNA | upstream | 95846 | 14466438 ~ 14466674 (+) | True | G211058 |
| TU249994 | lncRNA | upstream | 128465 | 14433827 ~ 14434055 (+) | True | G211032 |
| TU249993 | lncRNA | upstream | 129225 | 14432370 ~ 14433295 (+) | True | G211031 |
| TU249968 | lncRNA | upstream | 182623 | 14378543 ~ 14379897 (+) | True | G211006 |
| TU250095 | lncRNA | downstream | 41696 | 14604717 ~ 14692759 (+) | True | G211117 |
| TU250097 | lncRNA | downstream | 56208 | 14619229 ~ 14621407 (+) | False | socs3a |
| XR_003402940.2 | lncRNA | downstream | 80695 | 14643716 ~ 14644243 (+) | True | LOC113528421 |
| TU250211 | lncRNA | downstream | 151650 | 14714671 ~ 14714875 (+) | True | G211208 |
| TU250263 | lncRNA | downstream | 275269 | 14838290 ~ 14843289 (+) | False | LOC113527943 |
| XM_034309828.1 | mRNA | upstream | 34991 | 14501308 ~ 14527529 (+) | False | usp36 |
| XM_026916094.2 | mRNA | upstream | 34991 | 14501308 ~ 14527529 (+) | False | usp36 |
| XM_034309827.1 | mRNA | upstream | 34991 | 14501324 ~ 14527529 (+) | False | usp36 |
| XM_026916095.2 | mRNA | upstream | 34991 | 14501324 ~ 14527529 (+) | False | usp36 |
| XM_026916097.2 | mRNA | upstream | 34991 | 14507257 ~ 14527529 (+) | True | usp36 |
| XM_026917132.2 | mRNA | downstream | 7656 | 14570677 ~ 14601007 (+) | False | cyth1a |
| XM_026916947.2 | mRNA | downstream | 56183 | 14619204 ~ 14621788 (+) | True | socs3a |
| XM_026917065.2 | mRNA | downstream | 315945 | 14878966 ~ 14899732 (+) | True | hid1a |
| XM_026917066.2 | mRNA | downstream | 315945 | 14878966 ~ 14899732 (+) | False | hid1a |
| XM_026916009.2 | mRNA | downstream | 349168 | 14912189 ~ 14920677 (+) | True | ush1ga |
| XR_004579399.1 | other | upstream | 1069670 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| XR_003402925.2 | other | upstream | 2373931 | 12158706 ~ 12188589 (+) | False | arhgap17b |
| XR_004579334.1 | other | upstream | 2984697 | 11567119 ~ 11577823 (+) | False | luc7l3 |
| XR_003402977.1 | other | upstream | 3025355 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
| TU247339 | other | upstream | 4144639 | 10412984 ~ 10417881 (+) | True | G208781 |
| trnar-ucu_8 | other | downstream | 1250221 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU251011 | other | downstream | 1355196 | 15918217 ~ 15968759 (+) | True | G211913 |
| TU251142 | other | downstream | 1577309 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251743 | other | downstream | 2524270 | 17087291 ~ 17109275 (+) | False | srl |
| XR_004579361.1 | other | downstream | 3620998 | 18184019 ~ 18341937 (+) | True | LOC113528485 |
