Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU250855 |
| length | 236 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G211774 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 15547827 ~ 15548062 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU250854 | lncRNA | downstream | 68 | 15547555 ~ 15547759 (-) | True | G211773 |
| TU250824 | lncRNA | downstream | 37544 | 15509697 ~ 15510283 (-) | True | G211751 |
| TU250806 | lncRNA | downstream | 74484 | 15471948 ~ 15473343 (-) | True | G211737 |
| XR_003402916.2 | lncRNA | downstream | 75010 | 15471944 ~ 15472817 (-) | True | LOC113528255 |
| TU250805 | lncRNA | downstream | 75011 | 15471772 ~ 15472816 (-) | False | G211737 |
| TU250893 | lncRNA | upstream | 75645 | 15623707 ~ 15623990 (-) | False | G211800 |
| TU250894 | lncRNA | upstream | 75645 | 15623707 ~ 15624357 (-) | True | G211800 |
| TU250892 | lncRNA | upstream | 76042 | 15624104 ~ 15624357 (-) | False | G211800 |
| TU250897 | lncRNA | upstream | 78514 | 15626576 ~ 15627023 (-) | True | G211803 |
| TU250899 | lncRNA | upstream | 80671 | 15628733 ~ 15629969 (-) | True | G211805 |
| XM_034309829.1 | mRNA | downstream | 344643 | 15053544 ~ 15203184 (-) | True | si:ch73-374l24.1 |
| XM_034309830.1 | mRNA | downstream | 345035 | 15053544 ~ 15202792 (-) | False | si:ch73-374l24.1 |
| XM_026916124.2 | mRNA | downstream | 496184 | 15038370 ~ 15051643 (-) | True | cacng5b |
| XM_026916674.2 | mRNA | downstream | 561715 | 14979625 ~ 14986112 (-) | False | rac1b |
| XM_034310190.1 | mRNA | downstream | 575243 | 14955058 ~ 14972584 (-) | True | LOC113528182 |
| XM_026917092.2 | mRNA | upstream | 30392 | 15578454 ~ 15581065 (-) | True | LOC113528505 |
| XM_034309803.1 | mRNA | upstream | 34542 | 15582604 ~ 15595204 (-) | False | LOC113528397 |
| XM_034309802.1 | mRNA | upstream | 34542 | 15582604 ~ 15595204 (-) | True | LOC113528397 |
| XM_026916317.2 | mRNA | upstream | 59382 | 15607444 ~ 15617384 (-) | True | LOC113528053 |
| XM_034310048.1 | mRNA | upstream | 59383 | 15607445 ~ 15616939 (-) | False | LOC113528053 |
| XR_003402969.1 | other | downstream | 75915 | 15471777 ~ 15471912 (-) | True | LOC113528654 |
| XR_004579411.1 | other | downstream | 857695 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
| TU250141 | other | downstream | 1026852 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579449.1 | other | downstream | 1057052 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| XR_003402952.2 | other | downstream | 1518186 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579443.1 | other | upstream | 1744789 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579442.1 | other | upstream | 1744789 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579437.1 | other | upstream | 1744789 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579441.1 | other | upstream | 1744789 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579439.1 | other | upstream | 1744789 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
