Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU251473 |
| length | 448 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC113528039 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 16572545 ~ 16598688 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU251459 | lncRNA | downstream | 75888 | 16478891 ~ 16497232 (-) | True | G212319 |
| XR_003402922.2 | lncRNA | downstream | 117273 | 16453560 ~ 16455847 (-) | True | LOC113528275 |
| TU251176 | lncRNA | downstream | 419550 | 16151738 ~ 16153570 (-) | False | LOC113528178 |
| TU251177 | lncRNA | downstream | 419606 | 16151105 ~ 16153514 (-) | False | LOC113528178 |
| TU251126 | lncRNA | downstream | 532721 | 16039756 ~ 16040399 (-) | True | G212018 |
| TU251546 | lncRNA | upstream | 107617 | 16681184 ~ 16690337 (-) | True | G212395 |
| TU251514 | lncRNA | upstream | 187665 | 16761232 ~ 16764671 (-) | True | LOC113527915 |
| TU251619 | lncRNA | upstream | 258401 | 16831968 ~ 16832219 (-) | True | G212463 |
| TU251855 | lncRNA | upstream | 604961 | 17178528 ~ 17179748 (-) | True | G212626 |
| TU251866 | lncRNA | upstream | 710933 | 17284500 ~ 17284707 (-) | True | G212637 |
| XM_026916166.2 | mRNA | downstream | 27480 | 16538381 ~ 16545640 (-) | True | LOC113527963 |
| XM_026916944.2 | mRNA | downstream | 35866 | 16501121 ~ 16537254 (-) | True | LOC113528411 |
| XM_026917098.2 | mRNA | downstream | 242581 | 16326885 ~ 16330539 (-) | True | sox8a |
| XM_026916252.2 | mRNA | downstream | 345678 | 16225651 ~ 16227442 (-) | True | LOC113528022 |
| XM_034310215.1 | mRNA | downstream | 369129 | 16151075 ~ 16203991 (-) | False | LOC113528178 |
| XM_026916293.2 | mRNA | upstream | 41524 | 16615091 ~ 16634737 (-) | True | LOC113528041 |
| XM_034310191.1 | mRNA | upstream | 97578 | 16671145 ~ 16688599 (-) | True | LOC117595684 |
| XM_034309987.1 | mRNA | upstream | 97578 | 16671145 ~ 16677834 (-) | True | LOC113528100 |
| XM_026916431.2 | mRNA | upstream | 117943 | 16691510 ~ 16736757 (-) | True | abca3b |
| XM_026916081.2 | mRNA | upstream | 164374 | 16737941 ~ 16752068 (-) | True | ccnf |
| XR_003402969.1 | other | downstream | 1101208 | 15471777 ~ 15471912 (-) | True | LOC113528654 |
| XR_004579411.1 | other | downstream | 1882988 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
| TU250141 | other | downstream | 2052145 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579449.1 | other | downstream | 2082345 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| XR_003402952.2 | other | downstream | 2543479 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579443.1 | other | upstream | 719284 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579442.1 | other | upstream | 719284 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579437.1 | other | upstream | 719284 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579441.1 | other | upstream | 719284 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579439.1 | other | upstream | 719284 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
