Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU251743 |
| length | 452 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 4 |
| gene id | srl |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 17087284 ~ 17113156 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU251703 | lncRNA | upstream | 31484 | 17052378 ~ 17055807 (+) | True | G212541 |
| TU251602 | lncRNA | upstream | 159309 | 16869758 ~ 16927982 (+) | True | G212446 |
| TU251605 | lncRNA | upstream | 159922 | 16923805 ~ 16927369 (+) | True | G212449 |
| TU251601 | lncRNA | upstream | 172718 | 16842948 ~ 16914573 (+) | True | G212445 |
| TU251594 | lncRNA | upstream | 276541 | 16810311 ~ 16810750 (+) | True | G212441 |
| TU251750 | lncRNA | downstream | 961 | 17110236 ~ 17113156 (+) | False | srl |
| TU251769 | lncRNA | downstream | 70519 | 17179794 ~ 17180253 (+) | True | G212571 |
| XR_004579348.1 | lncRNA | downstream | 167379 | 17276654 ~ 17285842 (+) | True | LOC117598773 |
| TU251783 | lncRNA | downstream | 175008 | 17284283 ~ 17284486 (+) | True | G212582 |
| TU251790 | lncRNA | downstream | 187133 | 17296408 ~ 17296874 (+) | True | G212589 |
| XM_026917074.2 | mRNA | upstream | 1536 | 17067237 ~ 17085755 (+) | True | tfap4 |
| XM_034309796.1 | mRNA | upstream | 88597 | 16997366 ~ 16998694 (+) | True | LOC117595691 |
| XM_034310192.1 | mRNA | upstream | 89639 | 16995855 ~ 16997652 (+) | True | LOC113528633 |
| XM_034309795.1 | mRNA | upstream | 115524 | 16832403 ~ 16971767 (+) | False | LOC113528175 |
| XM_026917291.2 | mRNA | upstream | 115524 | 16967041 ~ 16971767 (+) | False | LOC113528175 |
| XM_026916268.2 | mRNA | downstream | 210467 | 17319742 ~ 17342075 (+) | True | trap1 |
| XM_026916309.2 | mRNA | downstream | 589398 | 17698673 ~ 17733006 (+) | False | cenpx |
| XM_026916308.2 | mRNA | downstream | 589398 | 17698673 ~ 17730565 (+) | True | cenpx |
| XM_026916307.2 | mRNA | downstream | 589398 | 17698673 ~ 17722261 (+) | False | cenpx |
| XM_026916310.2 | mRNA | downstream | 589398 | 17698673 ~ 17702742 (+) | False | cenpx |
| TU251142 | other | upstream | 941907 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251011 | other | upstream | 1118532 | 15918217 ~ 15968759 (+) | True | G211913 |
| trnar-ucu_8 | other | upstream | 1273960 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| XR_004579399.1 | other | upstream | 3594441 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| XR_003402925.2 | other | upstream | 4898702 | 12158706 ~ 12188589 (+) | False | arhgap17b |
| XR_004579361.1 | other | downstream | 1074744 | 18184019 ~ 18341937 (+) | True | LOC113528485 |
| TU252614 | other | downstream | 1805451 | 18914726 ~ 18919872 (+) | True | smim22 |
| TU252615 | other | downstream | 1805451 | 18914726 ~ 18919872 (+) | False | smim22 |
| TU252829 | other | downstream | 2034799 | 19144074 ~ 19145240 (+) | True | G213491 |
| XR_004579333.1 | other | downstream | 2192080 | 19301355 ~ 19313218 (+) | True | gng13b |
