Item | Value |
---|---|
RNA id | TU251783 |
length | 204 |
lncRNA type | inter_gene |
GC content | 0.40 |
exon number | 1 |
gene id | G212582 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047607.1 |
NCBI id | CM018553.1 |
chromosome length | 26458119 |
location | 17284283 ~ 17284486 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU251769 | lncRNA | upstream | 104030 | 17179794 ~ 17180253 (+) | True | G212571 |
TU251750 | lncRNA | upstream | 171127 | 17110236 ~ 17113156 (+) | False | srl |
TU251703 | lncRNA | upstream | 228476 | 17052378 ~ 17055807 (+) | True | G212541 |
TU251602 | lncRNA | upstream | 356301 | 16869758 ~ 16927982 (+) | True | G212446 |
TU251790 | lncRNA | downstream | 11922 | 17296408 ~ 17296874 (+) | True | G212589 |
TU251893 | lncRNA | downstream | 100478 | 17384964 ~ 17385177 (+) | True | G212662 |
TU251986 | lncRNA | downstream | 377469 | 17661955 ~ 17662194 (+) | True | G212728 |
TU251987 | lncRNA | downstream | 379249 | 17663735 ~ 17663960 (+) | True | G212729 |
TU251980 | lncRNA | downstream | 407605 | 17692091 ~ 17694083 (+) | True | G212722 |
XM_026917225.2 | mRNA | upstream | 171513 | 17087284 ~ 17112770 (+) | True | srl |
XM_026917226.2 | mRNA | upstream | 171513 | 17087285 ~ 17112770 (+) | False | srl |
XM_026917074.2 | mRNA | upstream | 198528 | 17067237 ~ 17085755 (+) | True | tfap4 |
XM_034309796.1 | mRNA | upstream | 285589 | 16997366 ~ 16998694 (+) | True | LOC117595691 |
XM_034310192.1 | mRNA | upstream | 286631 | 16995855 ~ 16997652 (+) | True | LOC113528633 |
XM_026916268.2 | mRNA | downstream | 35256 | 17319742 ~ 17342075 (+) | True | trap1 |
XM_026916309.2 | mRNA | downstream | 414187 | 17698673 ~ 17733006 (+) | False | cenpx |
XM_026916308.2 | mRNA | downstream | 414187 | 17698673 ~ 17730565 (+) | True | cenpx |
XM_026916307.2 | mRNA | downstream | 414187 | 17698673 ~ 17722261 (+) | False | cenpx |
XM_026916310.2 | mRNA | downstream | 414187 | 17698673 ~ 17702742 (+) | False | cenpx |
TU251743 | other | upstream | 175008 | 17087291 ~ 17109275 (+) | False | srl |
TU251142 | other | upstream | 1138899 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
TU251011 | other | upstream | 1315524 | 15918217 ~ 15968759 (+) | True | G211913 |
trnar-ucu_8 | other | upstream | 1470952 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
XR_004579399.1 | other | upstream | 3791433 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
XR_004579361.1 | other | downstream | 899533 | 18184019 ~ 18341937 (+) | True | LOC113528485 |
TU252614 | other | downstream | 1630240 | 18914726 ~ 18919872 (+) | True | smim22 |
TU252615 | other | downstream | 1630240 | 18914726 ~ 18919872 (+) | False | smim22 |
TU252829 | other | downstream | 1859588 | 19144074 ~ 19145240 (+) | True | G213491 |
XR_004579333.1 | other | downstream | 2016869 | 19301355 ~ 19313218 (+) | True | gng13b |