Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU251855 |
| length | 1221 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G212626 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 17178528 ~ 17179748 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU251619 | lncRNA | downstream | 346309 | 16831968 ~ 16832219 (-) | True | G212463 |
| TU251514 | lncRNA | downstream | 413857 | 16761232 ~ 16764671 (-) | True | LOC113527915 |
| TU251546 | lncRNA | downstream | 488191 | 16681184 ~ 16690337 (-) | True | G212395 |
| TU251473 | lncRNA | downstream | 604961 | 16573120 ~ 16573567 (-) | False | LOC113528039 |
| TU251459 | lncRNA | downstream | 681296 | 16478891 ~ 16497232 (-) | True | G212319 |
| TU251866 | lncRNA | upstream | 104752 | 17284500 ~ 17284707 (-) | True | G212637 |
| TU251872 | lncRNA | upstream | 112612 | 17292360 ~ 17292723 (-) | True | G212643 |
| TU251856 | lncRNA | upstream | 113025 | 17292773 ~ 17296160 (-) | False | LOC113528519 |
| TU251883 | lncRNA | upstream | 160839 | 17340587 ~ 17342051 (-) | True | G212654 |
| TU251892 | lncRNA | upstream | 204656 | 17384404 ~ 17384633 (-) | True | G212661 |
| XM_026917289.2 | mRNA | downstream | 139584 | 16974721 ~ 17038944 (-) | True | glis2b |
| XM_026917290.2 | mRNA | downstream | 246900 | 16909913 ~ 16931628 (-) | True | vasnb |
| XM_026916255.2 | mRNA | downstream | 349444 | 16820240 ~ 16829084 (-) | True | dnaja3a |
| XM_034310079.1 | mRNA | downstream | 398875 | 16770298 ~ 16779653 (-) | True | LOC113527928 |
| XM_026916082.2 | mRNA | downstream | 413187 | 16762426 ~ 16765341 (-) | False | LOC113527915 |
| XM_026916073.2 | mRNA | upstream | 1248 | 17180996 ~ 17277356 (-) | True | crebbpb |
| XM_026917113.2 | mRNA | upstream | 113103 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XM_034310012.1 | mRNA | upstream | 210438 | 17390186 ~ 17518527 (-) | False | LOC113528038 |
| XM_034310010.1 | mRNA | upstream | 210438 | 17390186 ~ 17518527 (-) | False | LOC113528038 |
| XM_026916286.2 | mRNA | upstream | 210438 | 17390186 ~ 17518527 (-) | False | LOC113528038 |
| XR_003402969.1 | other | downstream | 1706616 | 15471777 ~ 15471912 (-) | True | LOC113528654 |
| XR_004579411.1 | other | downstream | 2488396 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
| TU250141 | other | downstream | 2657553 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579449.1 | other | downstream | 2687753 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| XR_003402952.2 | other | downstream | 3148887 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579443.1 | other | upstream | 113103 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579442.1 | other | upstream | 113103 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579437.1 | other | upstream | 113103 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579441.1 | other | upstream | 113103 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579439.1 | other | upstream | 113103 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
