Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026916308.2 |
| length | 1227 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 5 |
| gene id | cenpx |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 17698673 ~ 17733006 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K15360 | STRA13, CENPX, MHF2; centromere protein X |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU251980 | lncRNA | upstream | 4590 | 17692091 ~ 17694083 (+) | True | G212722 |
| TU251987 | lncRNA | upstream | 34713 | 17663735 ~ 17663960 (+) | True | G212729 |
| TU251986 | lncRNA | upstream | 36479 | 17661955 ~ 17662194 (+) | True | G212728 |
| TU251893 | lncRNA | upstream | 313496 | 17384964 ~ 17385177 (+) | True | G212662 |
| TU251790 | lncRNA | upstream | 401799 | 17296408 ~ 17296874 (+) | True | G212589 |
| TU251981 | lncRNA | downstream | 2565 | 17733130 ~ 17734044 (+) | True | G212723 |
| TU252027 | lncRNA | downstream | 14145 | 17744710 ~ 17744984 (+) | True | G212765 |
| TU252040 | lncRNA | downstream | 48350 | 17778915 ~ 17779181 (+) | True | G212778 |
| TU252043 | lncRNA | downstream | 50215 | 17780780 ~ 17781027 (+) | True | G212781 |
| TU252044 | lncRNA | downstream | 50666 | 17781231 ~ 17781456 (+) | True | G212782 |
| XM_026916268.2 | mRNA | upstream | 356598 | 17319742 ~ 17342075 (+) | True | trap1 |
| XM_026917225.2 | mRNA | upstream | 585903 | 17087284 ~ 17112770 (+) | True | srl |
| XM_026917226.2 | mRNA | upstream | 585903 | 17087285 ~ 17112770 (+) | False | srl |
| XM_026917074.2 | mRNA | upstream | 612918 | 17067237 ~ 17085755 (+) | True | tfap4 |
| XM_034309796.1 | mRNA | upstream | 699979 | 16997366 ~ 16998694 (+) | True | LOC117595691 |
| XM_026916729.2 | mRNA | downstream | 18609 | 17749174 ~ 17767669 (+) | True | ccdc137 |
| XM_026916907.2 | mRNA | downstream | 77707 | 17808272 ~ 17810490 (+) | True | LOC113528388 |
| XM_026916702.2 | mRNA | downstream | 290520 | 18021085 ~ 18043102 (+) | True | mfsd11 |
| XM_026916194.2 | mRNA | downstream | 331472 | 18062037 ~ 18063661 (+) | True | LOC113527984 |
| XM_034309866.1 | mRNA | downstream | 453128 | 18183693 ~ 18342960 (+) | False | LOC113528485 |
| TU251743 | other | upstream | 589398 | 17087291 ~ 17109275 (+) | False | srl |
| TU251142 | other | upstream | 1553289 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251011 | other | upstream | 1729914 | 15918217 ~ 15968759 (+) | True | G211913 |
| trnar-ucu_8 | other | upstream | 1885342 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| XR_004579399.1 | other | upstream | 4205823 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| XR_004579361.1 | other | downstream | 453454 | 18184019 ~ 18341937 (+) | True | LOC113528485 |
| TU252614 | other | downstream | 1184161 | 18914726 ~ 18919872 (+) | True | smim22 |
| TU252615 | other | downstream | 1184161 | 18914726 ~ 18919872 (+) | False | smim22 |
| TU252829 | other | downstream | 1413509 | 19144074 ~ 19145240 (+) | True | G213491 |
| XR_004579333.1 | other | downstream | 1570790 | 19301355 ~ 19313218 (+) | True | gng13b |
