Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU252004 |
| length | 1028 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G212745 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 17733126 ~ 17734153 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU252002 | lncRNA | downstream | 34539 | 17694226 ~ 17698587 (-) | False | LOC113528348 |
| XR_003402929.2 | lncRNA | downstream | 34543 | 17687055 ~ 17698583 (-) | False | LOC113528348 |
| XR_003402927.2 | lncRNA | downstream | 34543 | 17687055 ~ 17698583 (-) | True | LOC113528348 |
| TU252000 | lncRNA | downstream | 41100 | 17690066 ~ 17692026 (-) | False | LOC113528348 |
| TU251957 | lncRNA | downstream | 214605 | 17475995 ~ 17518521 (-) | False | LOC113528038 |
| TU252026 | lncRNA | upstream | 7643 | 17741796 ~ 17743445 (-) | True | G212764 |
| TU252081 | lncRNA | upstream | 14275 | 17748428 ~ 17755196 (-) | True | G212815 |
| TU252091 | lncRNA | upstream | 40381 | 17774534 ~ 17774750 (-) | True | G212824 |
| TU252099 | lncRNA | upstream | 47193 | 17781346 ~ 17781654 (-) | True | G212832 |
| TU252110 | lncRNA | upstream | 62073 | 17796226 ~ 17796428 (-) | True | G212843 |
| XM_026916291.2 | mRNA | downstream | 214599 | 17390186 ~ 17518527 (-) | False | LOC113528038 |
| XM_026917216.2 | mRNA | upstream | 77460 | 17811613 ~ 17872581 (-) | False | tsen54 |
| XM_034310225.1 | mRNA | upstream | 77460 | 17811613 ~ 17853708 (-) | False | tsen54 |
| XM_026916227.2 | mRNA | upstream | 196556 | 17930709 ~ 17934416 (-) | True | foxj1a |
| XM_026916226.2 | mRNA | upstream | 196557 | 17930710 ~ 17934414 (-) | False | foxj1a |
| XM_026917086.2 | mRNA | upstream | 246860 | 17981013 ~ 17985888 (-) | True | jmjd6 |
| TU252009 | other | downstream | 57842 | 17674827 ~ 17675284 (-) | True | G212750 |
| TU251953 | other | downstream | 307225 | 17386211 ~ 17425901 (-) | True | G212700 |
| XR_004579438.1 | other | downstream | 413407 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| TU252076 | other | upstream | 94014 | 17828167 ~ 17853639 (-) | True | tsen54 |
| TU252457 | other | upstream | 641924 | 18376077 ~ 18377363 (-) | False | LOC117598999 |
| trnat-cgu_6 | other | upstream | 1342116 | 19076269 ~ 19076340 (-) | True | trnat-cgu_6 |
| TU253095 | other | upstream | 1710836 | 19444989 ~ 19448334 (-) | False | rbbp6 |
| TU253598 | other | upstream | 2306270 | 20040423 ~ 20063490 (-) | False | slc2a9l2 |
