Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU252293 |
| length | 498 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | zgc:163143 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 18425179 ~ 18434528 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU252284 | lncRNA | upstream | 13612 | 18411021 ~ 18411582 (+) | False | LOC113528171 |
| TU252283 | lncRNA | upstream | 14335 | 18409841 ~ 18410859 (+) | False | LOC113528171 |
| TU252169 | lncRNA | upstream | 442388 | 17980998 ~ 17982806 (+) | True | G212899 |
| TU252159 | lncRNA | upstream | 526213 | 17898781 ~ 17898981 (+) | True | G212889 |
| TU252140 | lncRNA | upstream | 538912 | 17886009 ~ 17886282 (+) | True | G212870 |
| TU252491 | lncRNA | downstream | 91260 | 18517313 ~ 18565782 (+) | True | G213191 |
| TU252492 | lncRNA | downstream | 104306 | 18530359 ~ 18534344 (+) | True | G213192 |
| TU252523 | lncRNA | downstream | 280364 | 18706417 ~ 18713626 (+) | True | G213221 |
| TU252548 | lncRNA | downstream | 420163 | 18846216 ~ 18898291 (+) | True | G213244 |
| TU252634 | lncRNA | downstream | 532977 | 18959030 ~ 18960740 (+) | True | G213314 |
| XM_034310202.1 | mRNA | upstream | 9847 | 18409843 ~ 18415347 (+) | True | LOC113528171 |
| XM_034310284.1 | mRNA | upstream | 56605 | 18360781 ~ 18368589 (+) | False | tac4 |
| XM_034310283.1 | mRNA | upstream | 56605 | 18367397 ~ 18368589 (+) | True | tac4 |
| XM_034309863.1 | mRNA | upstream | 82234 | 18184024 ~ 18342960 (+) | False | LOC113528485 |
| XM_026916958.2 | mRNA | downstream | 23233 | 18449286 ~ 18451161 (+) | True | LOC113528424 |
| XM_026916477.2 | mRNA | downstream | 46331 | 18472384 ~ 18558892 (+) | True | sept9a |
| XM_026916480.2 | mRNA | downstream | 56491 | 18482544 ~ 18558892 (+) | False | sept9a |
| XM_026916478.2 | mRNA | downstream | 67330 | 18493383 ~ 18558892 (+) | False | sept9a |
| XM_026916479.2 | mRNA | downstream | 76908 | 18502961 ~ 18558892 (+) | False | sept9a |
| XR_004579361.1 | other | upstream | 83257 | 18184019 ~ 18341937 (+) | True | LOC113528485 |
| TU251743 | other | upstream | 1315919 | 17087291 ~ 17109275 (+) | False | srl |
| TU251142 | other | upstream | 2279810 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251011 | other | upstream | 2456435 | 15918217 ~ 15968759 (+) | True | G211913 |
| trnar-ucu_8 | other | upstream | 2611863 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU252614 | other | downstream | 488673 | 18914726 ~ 18919872 (+) | True | smim22 |
| TU252615 | other | downstream | 488673 | 18914726 ~ 18919872 (+) | False | smim22 |
| TU252829 | other | downstream | 718021 | 19144074 ~ 19145240 (+) | True | G213491 |
| XR_004579333.1 | other | downstream | 875302 | 19301355 ~ 19313218 (+) | True | gng13b |
| TU253379 | other | downstream | 1480149 | 19906202 ~ 19910165 (+) | False | LOC113528458 |
