Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579422.1 |
| length | 765 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC117598999 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 18375684 ~ 18377363 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579431.1 | lncRNA | downstream | 299297 | 18070785 ~ 18076387 (-) | True | LOC117599003 |
| TU252323 | lncRNA | downstream | 321469 | 18050735 ~ 18054215 (-) | False | mettl23 |
| TU252320 | lncRNA | downstream | 321469 | 18050833 ~ 18054215 (-) | True | mettl23 |
| TU252315 | lncRNA | downstream | 332405 | 18041404 ~ 18043279 (-) | True | G213028 |
| TU252161 | lncRNA | downstream | 475414 | 17900070 ~ 17900270 (-) | True | G212891 |
| TU252732 | lncRNA | upstream | 415180 | 18792435 ~ 18849147 (-) | True | G213407 |
| TU252741 | lncRNA | upstream | 446216 | 18823471 ~ 18827432 (-) | True | si:dkey-204f11.64 |
| TU252898 | lncRNA | upstream | 646503 | 19023758 ~ 19031157 (-) | True | G213549 |
| TU252899 | lncRNA | upstream | 647817 | 19025072 ~ 19072985 (-) | False | G213549 |
| TU253100 | lncRNA | upstream | 1039929 | 19417184 ~ 19422415 (-) | True | G213716 |
| XM_026916697.2 | mRNA | downstream | 213805 | 18101441 ~ 18161879 (-) | True | LOC113528252 |
| XM_026916911.2 | mRNA | downstream | 321468 | 18050803 ~ 18054216 (-) | False | mettl23 |
| XM_026916914.2 | mRNA | downstream | 321507 | 18050803 ~ 18054177 (-) | False | mettl23 |
| XM_026916913.1 | mRNA | downstream | 321522 | 18050803 ~ 18054162 (-) | False | mettl23 |
| XM_026916912.2 | mRNA | downstream | 321553 | 18050803 ~ 18054131 (-) | False | mettl23 |
| XM_034310201.1 | mRNA | upstream | 12627 | 18389882 ~ 18394978 (-) | True | LOC117598994 |
| XM_034310203.1 | mRNA | upstream | 199349 | 18576604 ~ 18577377 (-) | True | LOC117598995 |
| XM_034310063.1 | mRNA | upstream | 333825 | 18711080 ~ 18720341 (-) | True | znf207a |
| XM_026916637.2 | mRNA | upstream | 333825 | 18711080 ~ 18720334 (-) | False | znf207a |
| XM_026916638.2 | mRNA | upstream | 333825 | 18711080 ~ 18720334 (-) | False | znf207a |
| TU252076 | other | downstream | 522045 | 17828167 ~ 17853639 (-) | True | tsen54 |
| TU252009 | other | downstream | 700400 | 17674827 ~ 17675284 (-) | True | G212750 |
| TU251953 | other | downstream | 949783 | 17386211 ~ 17425901 (-) | True | G212700 |
| XR_004579434.1 | other | downstream | 1055965 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| trnat-cgu_6 | other | upstream | 699014 | 19076269 ~ 19076340 (-) | True | trnat-cgu_6 |
| TU253095 | other | upstream | 1067734 | 19444989 ~ 19448334 (-) | False | rbbp6 |
| TU253598 | other | upstream | 1663168 | 20040423 ~ 20063490 (-) | False | slc2a9l2 |
| trnal-aag_9 | other | upstream | 2035594 | 20412849 ~ 20412930 (-) | True | trnal-aag_9 |
| TU254170 | other | upstream | 2637184 | 21014439 ~ 21027259 (-) | True | fgf2 |
