Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026916707.2 |
| length | 838 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | smim22 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 18914726 ~ 18919942 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU252548 | lncRNA | upstream | 17575 | 18846216 ~ 18898291 (+) | True | G213244 |
| TU252523 | lncRNA | upstream | 202240 | 18706417 ~ 18713626 (+) | True | G213221 |
| TU252491 | lncRNA | upstream | 350084 | 18517313 ~ 18565782 (+) | True | G213191 |
| TU252492 | lncRNA | upstream | 381522 | 18530359 ~ 18534344 (+) | True | G213192 |
| TU252290 | lncRNA | upstream | 488240 | 18425239 ~ 18427626 (+) | False | zgc:163143 |
| TU252634 | lncRNA | downstream | 39088 | 18959030 ~ 18960740 (+) | True | G213314 |
| XR_004579329.1 | lncRNA | downstream | 159520 | 19079462 ~ 19082157 (+) | True | LOC117598754 |
| TU252799 | lncRNA | downstream | 159668 | 19079610 ~ 19081890 (+) | False | LOC117598754 |
| TU252813 | lncRNA | downstream | 187268 | 19107210 ~ 19161120 (+) | True | G213475 |
| TU252837 | lncRNA | downstream | 351389 | 19271331 ~ 19271589 (+) | True | G213498 |
| XM_026916207.2 | mRNA | upstream | 15885 | 18877674 ~ 18899981 (+) | True | rgs9a |
| XM_034310205.1 | mRNA | upstream | 15885 | 18877674 ~ 18899981 (+) | False | rgs9a |
| XM_034310206.1 | mRNA | upstream | 15885 | 18879148 ~ 18899981 (+) | False | rgs9a |
| XM_026916887.2 | mRNA | upstream | 79665 | 18829293 ~ 18836201 (+) | True | clpp |
| XM_034309923.1 | mRNA | upstream | 114049 | 18793305 ~ 18801817 (+) | True | yipf2 |
| XM_026916001.2 | mRNA | downstream | 18629 | 18938571 ~ 18954755 (+) | True | engase |
| XM_034310299.1 | mRNA | downstream | 51456 | 18971398 ~ 18980644 (+) | True | coil |
| XM_026916029.2 | mRNA | downstream | 61931 | 18981873 ~ 19026526 (+) | False | rab11fip4a |
| XM_026916028.2 | mRNA | downstream | 62655 | 18982597 ~ 19026526 (+) | True | rab11fip4a |
| XM_026916030.2 | mRNA | downstream | 76432 | 18996374 ~ 19026526 (+) | False | rab11fip4a |
| XR_004579361.1 | other | upstream | 573929 | 18184019 ~ 18341937 (+) | True | LOC113528485 |
| TU251743 | other | upstream | 1806591 | 17087291 ~ 17109275 (+) | False | srl |
| TU251142 | other | upstream | 2770482 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251011 | other | upstream | 2947107 | 15918217 ~ 15968759 (+) | True | G211913 |
| trnar-ucu_8 | other | upstream | 3102535 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU252829 | other | downstream | 224132 | 19144074 ~ 19145240 (+) | True | G213491 |
| XR_004579333.1 | other | downstream | 381413 | 19301355 ~ 19313218 (+) | True | gng13b |
| TU253379 | other | downstream | 986260 | 19906202 ~ 19910165 (+) | False | LOC113528458 |
| XR_004579366.1 | other | downstream | 1013882 | 19933824 ~ 19953286 (+) | False | LOC113528304 |
| TU253418 | other | downstream | 1058372 | 19978314 ~ 19981380 (+) | True | G214015 |
