Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU253270 |
| length | 426 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G213879 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 19663337 ~ 19663762 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU253100 | lncRNA | downstream | 240922 | 19417184 ~ 19422415 (-) | True | G213716 |
| TU252899 | lncRNA | downstream | 590352 | 19025072 ~ 19072985 (-) | False | G213549 |
| TU252898 | lncRNA | downstream | 632180 | 19023758 ~ 19031157 (-) | True | G213549 |
| TU252732 | lncRNA | downstream | 814190 | 18792435 ~ 18849147 (-) | True | G213407 |
| TU252741 | lncRNA | downstream | 835905 | 18823471 ~ 18827432 (-) | True | si:dkey-204f11.64 |
| TU253468 | lncRNA | upstream | 276592 | 19940354 ~ 19984149 (-) | False | lyar |
| TU253590 | lncRNA | upstream | 356790 | 20020552 ~ 20056144 (-) | True | G214159 |
| TU253634 | lncRNA | upstream | 542032 | 20205794 ~ 20207145 (-) | False | hs3st1 |
| TU253789 | lncRNA | upstream | 772290 | 20436052 ~ 20438834 (-) | True | G214325 |
| TU253795 | lncRNA | upstream | 781761 | 20445523 ~ 20445748 (-) | True | G214331 |
| XM_026916904.2 | mRNA | downstream | 3309 | 19641250 ~ 19660028 (-) | True | ca10b |
| XM_034309789.1 | mRNA | downstream | 26389 | 19629991 ~ 19636948 (-) | True | smarce1 |
| XM_026916503.2 | mRNA | downstream | 37721 | 19518879 ~ 19625616 (-) | True | prkcbb |
| XM_026916501.2 | mRNA | downstream | 37722 | 19542665 ~ 19625615 (-) | False | prkcbb |
| XM_034310298.1 | mRNA | downstream | 159030 | 19471684 ~ 19504307 (-) | False | cacng3b |
| XM_026916671.2 | mRNA | upstream | 777 | 19664539 ~ 19715587 (-) | True | itga3a |
| XM_034309790.1 | mRNA | upstream | 67780 | 19731542 ~ 19740833 (-) | False | cdk5r1a |
| XM_026916942.2 | mRNA | upstream | 67780 | 19731542 ~ 19740833 (-) | False | cdk5r1a |
| XM_034309791.1 | mRNA | upstream | 67780 | 19731542 ~ 19740764 (-) | False | cdk5r1a |
| XM_034309792.1 | mRNA | upstream | 67780 | 19731542 ~ 19740619 (-) | False | cdk5r1a |
| TU253095 | other | downstream | 215003 | 19444989 ~ 19448334 (-) | False | rbbp6 |
| trnat-cgu_6 | other | downstream | 586997 | 19076269 ~ 19076340 (-) | True | trnat-cgu_6 |
| TU252457 | other | downstream | 1285974 | 18376077 ~ 18377363 (-) | False | LOC117598999 |
| TU252076 | other | downstream | 1809698 | 17828167 ~ 17853639 (-) | True | tsen54 |
| TU252009 | other | downstream | 1988053 | 17674827 ~ 17675284 (-) | True | G212750 |
| TU253598 | other | upstream | 376661 | 20040423 ~ 20063490 (-) | False | slc2a9l2 |
| trnal-aag_9 | other | upstream | 749087 | 20412849 ~ 20412930 (-) | True | trnal-aag_9 |
| TU254170 | other | upstream | 1350677 | 21014439 ~ 21027259 (-) | True | fgf2 |
| LOC113546932 | other | upstream | 2008400 | 21672162 ~ 21683433 (-) | True | LOC113546932 |
| LOC117598919 | other | upstream | 2009060 | 21672822 ~ 21673330 (-) | True | LOC117598919 |
