Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU253590 |
| length | 205 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G214159 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 20020552 ~ 20056144 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU253468 | lncRNA | downstream | 36403 | 19940354 ~ 19984149 (-) | False | lyar |
| TU253270 | lncRNA | downstream | 356790 | 19663337 ~ 19663762 (-) | True | G213879 |
| TU253100 | lncRNA | downstream | 598137 | 19417184 ~ 19422415 (-) | True | G213716 |
| TU252899 | lncRNA | downstream | 947567 | 19025072 ~ 19072985 (-) | False | G213549 |
| TU252898 | lncRNA | downstream | 989395 | 19023758 ~ 19031157 (-) | True | G213549 |
| TU253634 | lncRNA | upstream | 149650 | 20205794 ~ 20207145 (-) | False | hs3st1 |
| TU253789 | lncRNA | upstream | 379908 | 20436052 ~ 20438834 (-) | True | G214325 |
| TU253795 | lncRNA | upstream | 389379 | 20445523 ~ 20445748 (-) | True | G214331 |
| TU253976 | lncRNA | upstream | 722621 | 20778765 ~ 20781702 (-) | True | G214493 |
| TU254012 | lncRNA | upstream | 785287 | 20841431 ~ 20841634 (-) | True | G214526 |
| XM_026917108.2 | mRNA | downstream | 36991 | 19978416 ~ 19983561 (-) | True | lyar |
| XM_034310035.1 | mRNA | downstream | 36997 | 19978416 ~ 19983555 (-) | False | lyar |
| XM_026917156.2 | mRNA | downstream | 45909 | 19968040 ~ 19974643 (-) | True | tmem128 |
| XM_026917068.2 | mRNA | downstream | 59384 | 19953573 ~ 19961168 (-) | True | otop1 |
| XM_026916789.2 | mRNA | downstream | 86832 | 19920704 ~ 19933720 (-) | True | LOC113528305 |
| XM_026916840.2 | mRNA | upstream | 86733 | 20142877 ~ 20158387 (-) | True | wdr1 |
| XM_026916092.2 | mRNA | upstream | 121121 | 20177265 ~ 20195513 (-) | False | LOC113527919 |
| XM_026916091.2 | mRNA | upstream | 121121 | 20177265 ~ 20195513 (-) | False | LOC113527919 |
| XM_026916090.2 | mRNA | upstream | 121121 | 20177265 ~ 20195513 (-) | True | LOC113527919 |
| XM_026917223.2 | mRNA | upstream | 149195 | 20205339 ~ 20213629 (-) | True | hs3st1 |
| TU253095 | other | downstream | 572218 | 19444989 ~ 19448334 (-) | False | rbbp6 |
| trnat-cgu_6 | other | downstream | 944212 | 19076269 ~ 19076340 (-) | True | trnat-cgu_6 |
| TU252457 | other | downstream | 1643189 | 18376077 ~ 18377363 (-) | False | LOC117598999 |
| TU252076 | other | downstream | 2166913 | 17828167 ~ 17853639 (-) | True | tsen54 |
| TU252009 | other | downstream | 2345268 | 17674827 ~ 17675284 (-) | True | G212750 |
| trnal-aag_9 | other | upstream | 356705 | 20412849 ~ 20412930 (-) | True | trnal-aag_9 |
| TU254170 | other | upstream | 958295 | 21014439 ~ 21027259 (-) | True | fgf2 |
| LOC113546932 | other | upstream | 1616018 | 21672162 ~ 21683433 (-) | True | LOC113546932 |
| LOC117598919 | other | upstream | 1616678 | 21672822 ~ 21673330 (-) | True | LOC117598919 |
| LOC117598868 | other | upstream | 1619494 | 21675638 ~ 21676807 (-) | True | LOC117598868 |
