Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU254012 |
| length | 204 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G214526 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 20841431 ~ 20841634 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU253976 | lncRNA | downstream | 59729 | 20778765 ~ 20781702 (-) | True | G214493 |
| TU253795 | lncRNA | downstream | 395683 | 20445523 ~ 20445748 (-) | True | G214331 |
| TU253789 | lncRNA | downstream | 402597 | 20436052 ~ 20438834 (-) | True | G214325 |
| TU253634 | lncRNA | downstream | 634286 | 20205794 ~ 20207145 (-) | False | hs3st1 |
| TU253590 | lncRNA | downstream | 785287 | 20020552 ~ 20056144 (-) | True | G214159 |
| TU254118 | lncRNA | upstream | 58451 | 20900085 ~ 20904041 (-) | False | spry1 |
| TU254119 | lncRNA | upstream | 61464 | 20903098 ~ 20903837 (-) | True | G214626 |
| TU254389 | lncRNA | upstream | 395174 | 21236808 ~ 21257851 (-) | False | slc16a2 |
| TU254391 | lncRNA | upstream | 395224 | 21236858 ~ 21244785 (-) | False | slc16a2 |
| TU254446 | lncRNA | upstream | 486026 | 21327660 ~ 21329675 (-) | True | G214917 |
| XM_026917292.2 | mRNA | downstream | 144271 | 20607624 ~ 20697160 (-) | True | LOC113528637 |
| XM_026916811.2 | mRNA | downstream | 410916 | 20426759 ~ 20430515 (-) | True | LOC113528321 |
| XM_034309805.1 | mRNA | downstream | 416759 | 20419758 ~ 20424672 (-) | False | tmem107 |
| XM_026916948.2 | mRNA | downstream | 416759 | 20419762 ~ 20424672 (-) | True | tmem107 |
| XM_026916159.2 | mRNA | downstream | 423050 | 20414100 ~ 20418381 (-) | True | aurkb |
| XM_026916521.2 | mRNA | upstream | 58423 | 20900057 ~ 20905271 (-) | True | spry1 |
| XM_034309906.1 | mRNA | upstream | 62890 | 20904524 ~ 21003470 (-) | False | spata5 |
| XM_034309907.1 | mRNA | upstream | 67321 | 20908955 ~ 21003477 (-) | True | spata5 |
| XM_034309908.1 | mRNA | upstream | 67321 | 20908955 ~ 21003471 (-) | False | spata5 |
| XM_034309905.1 | mRNA | upstream | 67321 | 20908955 ~ 21003470 (-) | False | spata5 |
| trnal-aag_9 | other | downstream | 428501 | 20412849 ~ 20412930 (-) | True | trnal-aag_9 |
| TU253598 | other | downstream | 777941 | 20040423 ~ 20063490 (-) | False | slc2a9l2 |
| TU253095 | other | downstream | 1393097 | 19444989 ~ 19448334 (-) | False | rbbp6 |
| trnat-cgu_6 | other | downstream | 1765091 | 19076269 ~ 19076340 (-) | True | trnat-cgu_6 |
| TU252457 | other | downstream | 2464068 | 18376077 ~ 18377363 (-) | False | LOC117598999 |
| TU254170 | other | upstream | 172805 | 21014439 ~ 21027259 (-) | True | fgf2 |
| LOC113546932 | other | upstream | 830528 | 21672162 ~ 21683433 (-) | True | LOC113546932 |
| LOC117598919 | other | upstream | 831188 | 21672822 ~ 21673330 (-) | True | LOC117598919 |
| LOC117598868 | other | upstream | 834004 | 21675638 ~ 21676807 (-) | True | LOC117598868 |
| TU254923 | other | upstream | 834637 | 21676271 ~ 22215359 (-) | False | G215187 |
