Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU254480 |
| length | 303 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G214941 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 21406870 ~ 21458183 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254470 | lncRNA | downstream | 46971 | 21359697 ~ 21359899 (-) | True | G214933 |
| TU254466 | lncRNA | downstream | 49996 | 21354006 ~ 21356874 (-) | False | LOC113528016 |
| TU254446 | lncRNA | downstream | 77195 | 21327660 ~ 21329675 (-) | True | G214917 |
| TU254389 | lncRNA | downstream | 149019 | 21236808 ~ 21257851 (-) | False | slc16a2 |
| TU254504 | lncRNA | upstream | 6190 | 21464373 ~ 21464803 (-) | True | G214956 |
| TU254484 | lncRNA | upstream | 27057 | 21485240 ~ 21492497 (-) | True | LOC113540570 |
| XR_004579356.1 | lncRNA | upstream | 34092 | 21492275 ~ 21495618 (-) | False | LOC113540570 |
| XR_004579355.1 | lncRNA | upstream | 34092 | 21492275 ~ 21493450 (-) | False | LOC113540570 |
| XR_004579353.1 | lncRNA | upstream | 38246 | 21496429 ~ 21497974 (-) | True | LOC117598822 |
| XM_034309841.1 | mRNA | downstream | 26654 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 39758 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_026916544.2 | mRNA | downstream | 39761 | 21360562 ~ 21367109 (-) | False | arl9 |
| XM_026916242.2 | mRNA | downstream | 47680 | 21352281 ~ 21359190 (-) | True | LOC113528016 |
| XM_026936343.2 | mRNA | upstream | 127915 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | upstream | 127915 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309813.1 | mRNA | upstream | 868543 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 941502 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 1094541 | 22552724 ~ 22582102 (-) | True | topaz1 |
| TU254170 | other | downstream | 379611 | 21014439 ~ 21027259 (-) | True | fgf2 |
| trnal-aag_9 | other | downstream | 993940 | 20412849 ~ 20412930 (-) | True | trnal-aag_9 |
| TU253598 | other | downstream | 1343380 | 20040423 ~ 20063490 (-) | False | slc2a9l2 |
| TU253095 | other | downstream | 1958536 | 19444989 ~ 19448334 (-) | False | rbbp6 |
| trnat-cgu_6 | other | downstream | 2330530 | 19076269 ~ 19076340 (-) | True | trnat-cgu_6 |
| LOC113546932 | other | upstream | 213979 | 21672162 ~ 21683433 (-) | True | LOC113546932 |
| LOC117598919 | other | upstream | 214639 | 21672822 ~ 21673330 (-) | True | LOC117598919 |
| LOC117598868 | other | upstream | 217455 | 21675638 ~ 21676807 (-) | True | LOC117598868 |
| TU254923 | other | upstream | 218088 | 21676271 ~ 22215359 (-) | False | G215187 |
| LOC117598954 | other | upstream | 225841 | 21684024 ~ 21684645 (-) | True | LOC117598954 |
