Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU254573 |
| length | 475 |
| RNA type | TUCP |
| GC content | 0.45 |
| exon number | 3 |
| gene id | G215008 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 21711194 ~ 21721059 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254607 | lncRNA | upstream | 54359 | 21656261 ~ 21656835 (+) | True | G215042 |
| TU254346 | lncRNA | upstream | 76120 | 21634851 ~ 21635074 (+) | True | G214829 |
| TU254342 | lncRNA | upstream | 93900 | 21617095 ~ 21617294 (+) | True | G214825 |
| TU254247 | lncRNA | upstream | 145818 | 21557990 ~ 21565376 (+) | True | LOC113540569 |
| TU254249 | lncRNA | upstream | 154793 | 21551549 ~ 21556401 (+) | True | G214747 |
| TU254629 | lncRNA | downstream | 3552 | 21724611 ~ 22137078 (+) | True | G215059 |
| TU254636 | lncRNA | downstream | 53164 | 21774223 ~ 21807343 (+) | True | G215064 |
| XR_004579408.1 | lncRNA | downstream | 166972 | 21888031 ~ 21888800 (+) | True | LOC117598973 |
| XR_004579405.1 | lncRNA | downstream | 191553 | 21912612 ~ 21913349 (+) | True | LOC117598970 |
| TU254643 | lncRNA | downstream | 195360 | 21916419 ~ 21995065 (+) | True | G215069 |
| XM_034309812.1 | mRNA | upstream | 79288 | 21620631 ~ 21631906 (+) | True | rest |
| XM_034309844.1 | mRNA | upstream | 147393 | 21514573 ~ 21563801 (+) | False | LOC113540569 |
| XM_034309814.1 | mRNA | downstream | 742095 | 22463154 ~ 22490911 (+) | True | LOC113546930 |
| XM_034309815.1 | mRNA | downstream | 816443 | 22537502 ~ 22548866 (+) | True | LOC113546929 |
| XM_026947097.2 | mRNA | downstream | 893800 | 22614859 ~ 22621980 (+) | True | cckb |
| XM_034310060.1 | mRNA | downstream | 1012676 | 22733735 ~ 22754432 (+) | False | rnf44 |
| XM_034310059.1 | mRNA | downstream | 1019881 | 22740940 ~ 22754432 (+) | True | rnf44 |
| LOC117598775 | other | upstream | 42312 | 21668341 ~ 21668882 (+) | True | LOC117598775 |
| LOC117598774 | other | upstream | 45450 | 21664594 ~ 21665744 (+) | True | LOC117598774 |
| LOC117598848 | other | upstream | 47654 | 21663095 ~ 21663540 (+) | True | LOC117598848 |
| LOC117599000 | other | upstream | 50155 | 21660425 ~ 21661039 (+) | True | LOC117599000 |
| LOC117598992 | other | upstream | 52087 | 21658502 ~ 21659107 (+) | True | LOC117598992 |
| LOC117598855 | other | downstream | 5403 | 21726462 ~ 21727321 (+) | True | LOC117598855 |
| LOC117598777 | other | downstream | 9344 | 21730403 ~ 21731069 (+) | True | LOC117598777 |
| LOC117598939 | other | downstream | 102610 | 21823669 ~ 21824112 (+) | True | LOC117598939 |
| LOC117598860 | other | downstream | 108488 | 21829547 ~ 21830139 (+) | True | LOC117598860 |
| LOC117598953 | other | downstream | 110706 | 21831765 ~ 21832218 (+) | False | LOC117598953 |
