Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU254808 |
| length | 427 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G215182 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 21696660 ~ 22285703 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254864 | lncRNA | downstream | 13464 | 22236967 ~ 22240962 (-) | False | G215182 |
| TU254889 | lncRNA | downstream | 16915 | 22236967 ~ 22237511 (-) | False | G215182 |
| TU254995 | lncRNA | downstream | 57014 | 22164570 ~ 22197412 (-) | True | G215228 |
| TU254781 | lncRNA | downstream | 114286 | 22125672 ~ 22140140 (-) | True | G215172 |
| TU254985 | lncRNA | downstream | 118419 | 22080162 ~ 22136007 (-) | True | G215221 |
| TU255019 | lncRNA | upstream | 55712 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| TU255027 | lncRNA | upstream | 107026 | 22390356 ~ 22397751 (-) | True | G215249 |
| TU255043 | lncRNA | upstream | 162792 | 22446122 ~ 22543980 (-) | True | G215262 |
| TU255051 | lncRNA | upstream | 191691 | 22475021 ~ 22507863 (-) | True | G215269 |
| XR_004579407.1 | lncRNA | upstream | 194646 | 22477976 ~ 22480922 (-) | True | LOC117598972 |
| XM_026936343.2 | mRNA | downstream | 640551 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 640551 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 874210 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 887314 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_034309813.1 | mRNA | upstream | 43396 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 116355 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 269394 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 270299 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 270300 | 22553630 ~ 22582102 (-) | False | topaz1 |
| LOC117598908 | other | downstream | 3813 | 22250090 ~ 22250613 (-) | True | LOC117598908 |
| TU254814 | other | downstream | 7101 | 22230166 ~ 22247325 (-) | False | G215182 |
| TU254853 | other | downstream | 7101 | 22239216 ~ 22247325 (-) | False | G215182 |
| TU254832 | other | downstream | 7101 | 22244713 ~ 22247325 (-) | False | G215182 |
| LOC117598930 | other | downstream | 7211 | 22246772 ~ 22247215 (-) | True | LOC117598930 |
| LOC113546926 | other | upstream | 29457 | 22312787 ~ 22313437 (-) | False | LOC113546926 |
| TU255010 | other | upstream | 29591 | 22312921 ~ 22313871 (-) | True | LOC113546926 |
| LOC117598862 | other | upstream | 36214 | 22319544 ~ 22320275 (-) | True | LOC117598862 |
| XR_004579410.1 | other | upstream | 37844 | 22321174 ~ 22321733 (-) | True | LOC117598975 |
| TU255018 | other | upstream | 55712 | 22339042 ~ 22364265 (-) | False | LOC117598814 |
