Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU254875 |
| length | 411 |
| RNA type | TUCP |
| GC content | 0.49 |
| exon number | 4 |
| gene id | G215182 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 21696660 ~ 22285703 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254995 | lncRNA | downstream | 33859 | 22164570 ~ 22197412 (-) | True | G215228 |
| TU254781 | lncRNA | downstream | 91131 | 22125672 ~ 22140140 (-) | True | G215172 |
| TU254985 | lncRNA | downstream | 95264 | 22080162 ~ 22136007 (-) | True | G215221 |
| TU254991 | lncRNA | downstream | 97906 | 22121456 ~ 22133365 (-) | True | G215224 |
| TU254780 | lncRNA | downstream | 148428 | 22025483 ~ 22082843 (-) | True | G215171 |
| TU254808 | lncRNA | upstream | 9826 | 22254426 ~ 22283330 (-) | False | G215182 |
| TU254830 | lncRNA | upstream | 16397 | 22260997 ~ 22283330 (-) | False | G215182 |
| TU255019 | lncRNA | upstream | 94442 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| TU255027 | lncRNA | upstream | 145756 | 22390356 ~ 22397751 (-) | True | G215249 |
| TU255043 | lncRNA | upstream | 201522 | 22446122 ~ 22543980 (-) | True | G215262 |
| XM_026936343.2 | mRNA | downstream | 617396 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 617396 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 851055 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 864159 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_034309813.1 | mRNA | upstream | 82126 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 155085 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 308124 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 309029 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 309030 | 22553630 ~ 22582102 (-) | False | topaz1 |
| LOC117598926 | other | downstream | 669 | 22230158 ~ 22230602 (-) | True | LOC117598926 |
| LOC117598812 | other | downstream | 3324 | 22227441 ~ 22227947 (-) | True | LOC117598812 |
| TU254998 | other | downstream | 3328 | 22227448 ~ 22227943 (-) | False | LOC117598812 |
| LOC117598884 | other | downstream | 8420 | 22222397 ~ 22222851 (-) | True | LOC117598884 |
| LOC117598811 | other | downstream | 12207 | 22217308 ~ 22219064 (-) | True | LOC117598811 |
| TU254832 | other | upstream | 113 | 22244713 ~ 22247325 (-) | False | G215182 |
| LOC117598930 | other | upstream | 2172 | 22246772 ~ 22247215 (-) | True | LOC117598930 |
| LOC117598908 | other | upstream | 5490 | 22250090 ~ 22250613 (-) | True | LOC117598908 |
| TU255003 | other | upstream | 6331 | 22250931 ~ 22272210 (-) | True | G215235 |
| TU254852 | other | upstream | 9826 | 22254426 ~ 22283330 (-) | False | G215182 |
