Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU255043 |
| length | 296 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G215262 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22446122 ~ 22543980 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU255027 | lncRNA | downstream | 48371 | 22390356 ~ 22397751 (-) | True | G215249 |
| TU255019 | lncRNA | downstream | 101605 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| TU254808 | lncRNA | downstream | 162792 | 22254426 ~ 22283330 (-) | False | G215182 |
| TU254830 | lncRNA | downstream | 162792 | 22260997 ~ 22283330 (-) | False | G215182 |
| TU254864 | lncRNA | downstream | 205160 | 22236967 ~ 22240962 (-) | False | G215182 |
| TU255283 | lncRNA | upstream | 112562 | 22656542 ~ 22704479 (-) | False | smim13 |
| TU255306 | lncRNA | upstream | 189749 | 22733729 ~ 22734095 (-) | True | G215507 |
| TU255308 | lncRNA | upstream | 193296 | 22737276 ~ 22737479 (-) | True | G215509 |
| TU255292 | lncRNA | upstream | 210580 | 22754560 ~ 22755107 (-) | True | G215494 |
| TU255279 | lncRNA | upstream | 225657 | 22769637 ~ 22778819 (-) | False | cltb |
| XM_034310140.1 | mRNA | downstream | 26212 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309813.1 | mRNA | downstream | 100343 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_026936343.2 | mRNA | downstream | 832247 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 832247 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 1065906 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_034309681.1 | mRNA | upstream | 8744 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 9649 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 9650 | 22553630 ~ 22582102 (-) | False | topaz1 |
| XM_026947029.2 | mRNA | upstream | 9651 | 22553631 ~ 22582102 (-) | False | topaz1 |
| XM_026947030.2 | mRNA | upstream | 12422 | 22556402 ~ 22582102 (-) | False | topaz1 |
| XR_004579404.1 | other | downstream | 26212 | 22409234 ~ 22419910 (-) | False | LOC117598969 |
| XR_004579403.1 | other | downstream | 26212 | 22413667 ~ 22419910 (-) | True | LOC117598969 |
| TU255018 | other | downstream | 81857 | 22339042 ~ 22364265 (-) | False | LOC117598814 |
| XR_004579410.1 | other | downstream | 124389 | 22321174 ~ 22321733 (-) | True | LOC117598975 |
| LOC117598862 | other | downstream | 125847 | 22319544 ~ 22320275 (-) | True | LOC117598862 |
| TU255282 | other | upstream | 154433 | 22698413 ~ 22704479 (-) | False | smim13 |
| TU255280 | other | upstream | 225657 | 22769637 ~ 22778819 (-) | False | cltb |
| TU255434 | other | upstream | 592946 | 23136926 ~ 23156666 (-) | False | G215624 |
| TU255581 | other | upstream | 780505 | 23324485 ~ 23327870 (-) | False | fam193b |
| TU256261 | other | upstream | 1996855 | 24540835 ~ 24588450 (-) | False | usp7 |
