Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU255154 |
| length | 748 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G215360 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22854245 ~ 22857421 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU255085 | lncRNA | upstream | 23413 | 22827021 ~ 22830832 (+) | True | G215295 |
| TU255137 | lncRNA | upstream | 73669 | 22780290 ~ 22780576 (+) | True | trnat-cgu_7 |
| TU255136 | lncRNA | upstream | 75004 | 22778616 ~ 22779241 (+) | True | G215343 |
| TU255128 | lncRNA | upstream | 118259 | 22735771 ~ 22735986 (+) | True | G215336 |
| TU255084 | lncRNA | upstream | 127599 | 22724687 ~ 22726646 (+) | True | G215294 |
| TU255220 | lncRNA | downstream | 72067 | 22929488 ~ 22929797 (+) | True | G215425 |
| TU255271 | lncRNA | downstream | 169022 | 23026443 ~ 23027619 (+) | True | G215476 |
| TU255274 | lncRNA | downstream | 178034 | 23035455 ~ 23035659 (+) | True | G215479 |
| TU255449 | lncRNA | downstream | 374097 | 23231518 ~ 23298835 (+) | True | LOC113546955 |
| TU255448 | lncRNA | downstream | 432865 | 23290286 ~ 23298835 (+) | False | LOC113546955 |
| XM_026947025.2 | mRNA | upstream | 29012 | 22781366 ~ 22825233 (+) | True | pdlim7 |
| XM_026947026.2 | mRNA | upstream | 29012 | 22786206 ~ 22825233 (+) | False | pdlim7 |
| XM_026947039.2 | mRNA | upstream | 84609 | 22765814 ~ 22769636 (+) | True | higd2a |
| XM_034310061.1 | mRNA | upstream | 99813 | 22740940 ~ 22754432 (+) | False | rnf44 |
| XM_026947058.2 | mRNA | downstream | 284293 | 23141714 ~ 23143760 (+) | True | LOC113546949 |
| XM_034310058.1 | mRNA | downstream | 289776 | 23147197 ~ 23156708 (+) | True | LOC113546924 |
| XM_026947060.2 | mRNA | downstream | 303042 | 23160463 ~ 23163243 (+) | True | LOC113546950 |
| XM_026947057.2 | mRNA | downstream | 310923 | 23168344 ~ 23170849 (+) | True | LOC113546948 |
| XM_026947067.2 | mRNA | downstream | 425827 | 23283248 ~ 23285620 (+) | True | atoh1b |
| TU255140 | other | upstream | 18343 | 22835664 ~ 22835902 (+) | True | G215347 |
| trnat-cgu_7 | other | upstream | 73888 | 22780286 ~ 22780357 (+) | False | trnat-cgu_7 |
| TU255135 | other | upstream | 84618 | 22765814 ~ 22769627 (+) | False | higd2a |
| LOC117598850 | other | upstream | 318469 | 22495208 ~ 22535776 (+) | True | LOC117598850 |
| TU255422 | other | downstream | 279825 | 23137246 ~ 23170553 (+) | True | G215621 |
| TU255420 | other | downstream | 284331 | 23141752 ~ 23170218 (+) | False | G215621 |
| XR_004579446.1 | other | downstream | 874033 | 23731454 ~ 23740984 (+) | True | LOC113546919 |
| TU255678 | other | downstream | 885134 | 23742555 ~ 23748067 (+) | False | igfbp7 |
| XR_004579369.1 | other | downstream | 1334332 | 24191753 ~ 24327960 (+) | False | rbfox1 |
