Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU255283 |
| length | 218 |
| lncRNA type | read_through |
| GC content | 0.48 |
| exon number | 3 |
| gene id | smim13 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22656542 ~ 22704483 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU255043 | lncRNA | downstream | 112562 | 22446122 ~ 22543980 (-) | True | G215262 |
| TU255051 | lncRNA | downstream | 148679 | 22475021 ~ 22507863 (-) | True | G215269 |
| XR_004579407.1 | lncRNA | downstream | 175620 | 22477976 ~ 22480922 (-) | True | LOC117598972 |
| TU255027 | lncRNA | downstream | 258791 | 22390356 ~ 22397751 (-) | True | G215249 |
| TU255019 | lncRNA | downstream | 312025 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| TU255306 | lncRNA | upstream | 29250 | 22733729 ~ 22734095 (-) | True | G215507 |
| TU255308 | lncRNA | upstream | 32797 | 22737276 ~ 22737479 (-) | True | G215509 |
| TU255292 | lncRNA | upstream | 50081 | 22754560 ~ 22755107 (-) | True | G215494 |
| TU255279 | lncRNA | upstream | 65158 | 22769637 ~ 22778819 (-) | False | cltb |
| TU255287 | lncRNA | upstream | 76844 | 22781323 ~ 22815252 (-) | False | G215489 |
| XM_026947008.2 | mRNA | downstream | 12279 | 22629881 ~ 22644263 (-) | True | trak1b |
| XM_034309656.1 | mRNA | downstream | 14704 | 22629881 ~ 22641838 (-) | False | trak1b |
| XM_034309657.1 | mRNA | downstream | 14945 | 22629881 ~ 22641597 (-) | False | trak1b |
| XM_034309658.1 | mRNA | downstream | 19921 | 22629881 ~ 22636621 (-) | False | trak1b |
| XM_034309681.1 | mRNA | downstream | 74440 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_034309816.1 | mRNA | upstream | 2075 | 22706554 ~ 22729853 (-) | True | cdhr2 |
| XM_034310258.1 | mRNA | upstream | 51502 | 22755981 ~ 22763871 (-) | True | faf2 |
| XM_026947036.2 | mRNA | upstream | 65160 | 22769639 ~ 22779068 (-) | True | cltb |
| XM_026947037.2 | mRNA | upstream | 65160 | 22769639 ~ 22779061 (-) | False | cltb |
| XM_026947038.2 | mRNA | upstream | 65160 | 22769639 ~ 22779057 (-) | False | cltb |
| XR_004579404.1 | other | downstream | 236632 | 22409234 ~ 22419910 (-) | False | LOC117598969 |
| XR_004579403.1 | other | downstream | 236632 | 22413667 ~ 22419910 (-) | True | LOC117598969 |
| TU255018 | other | downstream | 292277 | 22339042 ~ 22364265 (-) | False | LOC117598814 |
| XR_004579410.1 | other | downstream | 334809 | 22321174 ~ 22321733 (-) | True | LOC117598975 |
| LOC117598862 | other | downstream | 336267 | 22319544 ~ 22320275 (-) | True | LOC117598862 |
| TU255280 | other | upstream | 65158 | 22769637 ~ 22778819 (-) | False | cltb |
| TU255434 | other | upstream | 432447 | 23136926 ~ 23156666 (-) | False | G215624 |
| TU255581 | other | upstream | 620006 | 23324485 ~ 23327870 (-) | False | fam193b |
| TU256261 | other | upstream | 1836356 | 24540835 ~ 24588450 (-) | False | usp7 |
| trnad-guc_6 | other | upstream | 2160168 | 24864647 ~ 24864718 (-) | True | trnad-guc_6 |
