Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU255420 |
| length | 728 |
| RNA type | TUCP |
| GC content | 0.45 |
| exon number | 3 |
| gene id | G215621 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 23137246 ~ 23170553 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU255274 | lncRNA | upstream | 106093 | 23035455 ~ 23035659 (+) | True | G215479 |
| TU255271 | lncRNA | upstream | 114133 | 23026443 ~ 23027619 (+) | True | G215476 |
| TU255220 | lncRNA | upstream | 211955 | 22929488 ~ 22929797 (+) | True | G215425 |
| TU255144 | lncRNA | upstream | 232674 | 22841344 ~ 22909078 (+) | True | G215350 |
| TU255449 | lncRNA | downstream | 61300 | 23231518 ~ 23298835 (+) | True | LOC113546955 |
| TU255448 | lncRNA | downstream | 120068 | 23290286 ~ 23298835 (+) | False | LOC113546955 |
| XR_003404766.2 | lncRNA | downstream | 120116 | 23290334 ~ 23298702 (+) | False | LOC113546955 |
| TU255458 | lncRNA | downstream | 144951 | 23315169 ~ 23315568 (+) | True | G215638 |
| TU255457 | lncRNA | downstream | 146608 | 23316826 ~ 23317147 (+) | True | G215637 |
| XM_026947025.2 | mRNA | upstream | 316519 | 22781366 ~ 22825233 (+) | True | pdlim7 |
| XM_026947026.2 | mRNA | upstream | 316519 | 22786206 ~ 22825233 (+) | False | pdlim7 |
| XM_026947039.2 | mRNA | upstream | 372116 | 22765814 ~ 22769636 (+) | True | higd2a |
| XM_034310061.1 | mRNA | upstream | 387320 | 22740940 ~ 22754432 (+) | False | rnf44 |
| XM_026947067.2 | mRNA | downstream | 113030 | 23283248 ~ 23285620 (+) | True | atoh1b |
| XM_026947085.2 | mRNA | downstream | 172743 | 23342961 ~ 23355343 (+) | True | LOC113546963 |
| XM_026947121.2 | mRNA | downstream | 287585 | 23457803 ~ 23554508 (+) | True | LOC113546983 |
| XM_026947123.2 | mRNA | downstream | 287585 | 23457803 ~ 23554508 (+) | False | LOC113546983 |
| XM_026947122.2 | mRNA | downstream | 287585 | 23457803 ~ 23554508 (+) | False | LOC113546983 |
| TU255140 | other | upstream | 305850 | 22835664 ~ 22835902 (+) | True | G215347 |
| trnat-cgu_7 | other | upstream | 361395 | 22780286 ~ 22780357 (+) | False | trnat-cgu_7 |
| TU255135 | other | upstream | 372125 | 22765814 ~ 22769627 (+) | False | higd2a |
| LOC117598850 | other | upstream | 605976 | 22495208 ~ 22535776 (+) | True | LOC117598850 |
| XR_004579446.1 | other | downstream | 561236 | 23731454 ~ 23740984 (+) | True | LOC113546919 |
| TU255678 | other | downstream | 572337 | 23742555 ~ 23748067 (+) | False | igfbp7 |
| XR_004579369.1 | other | downstream | 1021535 | 24191753 ~ 24327960 (+) | False | rbfox1 |
| XR_004579370.1 | other | downstream | 1021535 | 24191753 ~ 24327960 (+) | False | rbfox1 |
| TU256099 | other | downstream | 1286852 | 24457070 ~ 24458004 (+) | True | G216197 |
