Item | Value |
---|---|
RNA id | TU256414 |
length | 260 |
lncRNA type | inter_gene |
GC content | 0.50 |
exon number | 1 |
gene id | G216467 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047607.1 |
NCBI id | CM018553.1 |
chromosome length | 26458119 |
location | 24706620 ~ 24706879 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU256410 | lncRNA | upstream | 11196 | 24695102 ~ 24695424 (+) | True | G216463 |
TU256406 | lncRNA | upstream | 19951 | 24686438 ~ 24686669 (+) | True | G216459 |
TU256164 | lncRNA | upstream | 112003 | 24565212 ~ 24594617 (+) | True | G216249 |
TU256144 | lncRNA | upstream | 118170 | 24540726 ~ 24588450 (+) | True | G216230 |
TU256059 | lncRNA | upstream | 233448 | 24470059 ~ 24473172 (+) | True | G216167 |
TU256435 | lncRNA | downstream | 32082 | 24738961 ~ 24739655 (+) | True | G216488 |
XR_004579447.1 | lncRNA | downstream | 122664 | 24829543 ~ 24854293 (+) | True | LOC117599007 |
TU256530 | lncRNA | downstream | 163239 | 24870118 ~ 24912805 (+) | True | G216577 |
TU256629 | lncRNA | downstream | 318205 | 25025084 ~ 25025573 (+) | True | G216652 |
TU256605 | lncRNA | downstream | 337500 | 25044379 ~ 25054895 (+) | True | G216631 |
XM_026947098.2 | mRNA | upstream | 131159 | 24569233 ~ 24575461 (+) | True | c13h16orf72 |
XM_026947091.2 | mRNA | upstream | 167503 | 24529769 ~ 24539117 (+) | True | si:ch211-157c3.4 |
XM_034310263.1 | mRNA | upstream | 167503 | 24529797 ~ 24539117 (+) | False | si:ch211-157c3.4 |
XM_034309896.1 | mRNA | upstream | 288074 | 24385737 ~ 24418546 (+) | True | abat |
XM_026947095.2 | mRNA | downstream | 104201 | 24811080 ~ 24829473 (+) | True | atf7ip2 |
XM_026947115.2 | mRNA | downstream | 160521 | 24867400 ~ 24895480 (+) | True | nubp1 |
XM_026947116.2 | mRNA | downstream | 160574 | 24867453 ~ 24896195 (+) | False | nubp1 |
XM_034310275.1 | mRNA | downstream | 192542 | 24899421 ~ 24920755 (+) | False | ciita |
XM_034310274.1 | mRNA | downstream | 192543 | 24899422 ~ 24920755 (+) | True | ciita |
TU256141 | other | upstream | 167578 | 24529679 ~ 24539042 (+) | False | si:ch211-157c3.4 |
TU256099 | other | upstream | 248616 | 24457070 ~ 24458004 (+) | True | G216197 |
TU256100 | other | upstream | 248616 | 24457070 ~ 24458004 (+) | False | G216197 |
XR_004579369.1 | other | upstream | 378660 | 24191753 ~ 24327960 (+) | False | rbfox1 |
TU256462 | other | downstream | 90375 | 24797254 ~ 24797678 (+) | True | G216515 |
trnai-uau_7 | other | downstream | 647897 | 25354776 ~ 25354868 (+) | True | trnai-uau_7 |
trnai-uau_8 | other | downstream | 648621 | 25355500 ~ 25355592 (+) | True | trnai-uau_8 |
TU257298 | other | downstream | 1598568 | 26305447 ~ 26306767 (+) | True | ier2a |