Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU256530 |
| length | 261 |
| lncRNA type | read_through |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G216577 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 24870118 ~ 24912805 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579447.1 | lncRNA | upstream | 15825 | 24829543 ~ 24854293 (+) | True | LOC117599007 |
| TU256435 | lncRNA | upstream | 130463 | 24738961 ~ 24739655 (+) | True | G216488 |
| TU256414 | lncRNA | upstream | 163239 | 24706620 ~ 24706879 (+) | True | G216467 |
| TU256410 | lncRNA | upstream | 174694 | 24695102 ~ 24695424 (+) | True | G216463 |
| TU256406 | lncRNA | upstream | 183449 | 24686438 ~ 24686669 (+) | True | G216459 |
| TU256629 | lncRNA | downstream | 112279 | 25025084 ~ 25025573 (+) | True | G216652 |
| TU256605 | lncRNA | downstream | 131574 | 25044379 ~ 25054895 (+) | True | G216631 |
| TU256646 | lncRNA | downstream | 243456 | 25156261 ~ 25157543 (+) | True | G216668 |
| TU256656 | lncRNA | downstream | 244875 | 25157680 ~ 25185402 (+) | True | G216674 |
| TU256657 | lncRNA | downstream | 253695 | 25166500 ~ 25189043 (+) | True | G216675 |
| XM_026947095.2 | mRNA | upstream | 40645 | 24811080 ~ 24829473 (+) | True | atf7ip2 |
| XM_026947098.2 | mRNA | upstream | 294657 | 24569233 ~ 24575461 (+) | True | c13h16orf72 |
| XM_026947091.2 | mRNA | upstream | 331001 | 24529769 ~ 24539117 (+) | True | si:ch211-157c3.4 |
| XM_034310263.1 | mRNA | upstream | 331001 | 24529797 ~ 24539117 (+) | False | si:ch211-157c3.4 |
| XM_034309897.1 | mRNA | upstream | 451572 | 24389928 ~ 24418546 (+) | False | abat |
| XM_034309818.1 | mRNA | downstream | 10695 | 24923500 ~ 24995766 (+) | True | clec16a |
| XM_026947016.2 | mRNA | downstream | 108464 | 25021269 ~ 25033735 (+) | True | pigq |
| XM_034309934.1 | mRNA | downstream | 123119 | 25035924 ~ 25053158 (+) | True | rab40c |
| XM_026909867.2 | mRNA | downstream | 242731 | 25155536 ~ 25221273 (+) | True | xylt1 |
| XM_026909803.2 | mRNA | downstream | 276046 | 25188851 ~ 25691424 (+) | True | rpl14 |
| TU256462 | other | upstream | 72440 | 24797254 ~ 24797678 (+) | True | G216515 |
| TU256141 | other | upstream | 331076 | 24529679 ~ 24539042 (+) | False | si:ch211-157c3.4 |
| TU256099 | other | upstream | 412114 | 24457070 ~ 24458004 (+) | True | G216197 |
| TU256100 | other | upstream | 412114 | 24457070 ~ 24458004 (+) | False | G216197 |
| XR_004579370.1 | other | upstream | 542158 | 24191753 ~ 24327960 (+) | False | rbfox1 |
| trnai-uau_7 | other | downstream | 441971 | 25354776 ~ 25354868 (+) | True | trnai-uau_7 |
| trnai-uau_8 | other | downstream | 442695 | 25355500 ~ 25355592 (+) | True | trnai-uau_8 |
| TU257298 | other | downstream | 1392642 | 26305447 ~ 26306767 (+) | True | ier2a |
