RNA id: TCONS_00000672


Basic Information

Item Value
RNA id TCONS_00000672
length 2799
RNA type mRNA
GC content 0.42
exon number 6
gene id XLOC_000393
representative False

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 33383644 ~ 33487375 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCTGAATCGTTCCTGCTGTACTTCAGCACGGAGCGTAAACACTGAGACACTCGCTGTCAACTTCAAACATGTGGAGGTTGTTACATTGTATCCTCGGCTTCATCAGGCTCTACTTAGATGGCGTGAAAGTCCTGCTATACCAGCTTTTCAACAAATCTTTCAGGCTGCCAGCTGGAAATGAAGAAGAGGAGGGTCTGGCAGCAGTAAAGAAGATTCAAGAAGAGTTGAATCAGGGAAAAGTGGAGTTCATGTACTTGGATTTGGCCTCTTTGACATCTGTTCGCCAGTTCGTCCAGAGATATAATGCCAAAGGTTTGCCTCTACATGTCCTTGTCAATAATGCTGGTGTTATGCTTGTTCCGGAGAGGAGAACAGAGGATGGATTTGAGCTACACTTTGGGCTAAACTACCTGGGCCATTTCCTGTTAACCAACCTGTTGCTGGGTGCACTTAGGAAGACTGGCAAACCTGGCAAATGTTCCCGAATAGTTATTATGTCTTCAGCTACCCACTATGGAGGGAGATTAACTCTGGATGACTTGCAGGGAAGGTTATGCTATAGTTCCCATGCTGCATATGCTCAGAGTAAGCTGGCCCTGCTGCTGCTCTCCTACCACCTGCAGGAGCAGTTGCTGGTCAGAGGAGATCCCGTGACGGTGAATGCGGTGGACCCCGGCATGGTGGACACGGCCCTCTATGACAATCTGTGCAGCCCGGCCCAGGTGGCCAAGAAGCCTTTCGCTAAACTGCTCTTCAGGACGCCTGCAGAAGGAGCATCCACGGCTATTTACGCCGCAGCTGCCTCTGAGCTGGAGGGGATCGGAGGACTGTATCTGTACAACGGCCGAAAGACTGAGTCCTCAGCACTGTCTTACGACAAACGCCTGCAAACCAAGCTGTGGAAACAAAGCTGTGCTCTTGTGGGACTCAAATGACTTGAGAGAACATTAGTACTGAATTCATCATCTCCATAATATGTCTATGCCTTAAGTTAACAGGTTAGTATCCCTATTTGCCAAACCGTCCAATggtgtttagtttattttaattaatatttcagtGTCAACACAAGCCATCCTTTAAGTTCCCAAGGACTTTACCTCATCAGTGTGTGATCGATGCTAACAAATgcgctgtatttatttatttttttttcatcctaAATTCTCTTTTTCTCCACTCTGGAATTCTCTAGACACTTTTTCTCCTGACTGAAGCAGGTAAAACAATGATTTCGATTCATAATCTTCTTGCTCTCCGCCAAGCTTTTCTGGGTGCTTAATGAATCAGGACCATCGCAATGGCTGTTCCACTGATTTTCTGTTGGATTTGATCAACAATGGAAGGATAAAAGGATTATATGGGAAATCTCAAGCGCTCGAAACTGGGCAAATACCAGCCTGTGTCTGATTCTCTTGGTTTCTGTGCTTGGCTTTTTGTGTCCTTCATTGTTAGTGTAGTTGTATATCTTCGGTGGCTCATACACTGGGTTATTCTGCCCATCAGTCAGTGTCATTCTTCCCTCTGCCTACCGCATCTAATTGCCTAAACACAAACTGCAGAAGGGCTAAGGGGGAAAAACATTTGTCTGTCTGAGCCCTTCATTTTTCATTCTTCCACCGTGCAATTTGCAATACTGTGTTTGGAAGATTCCACCGAAGCGACGGCTGCCCTCATGCCAGGTGCCTCACCTTCATCCACTTTTTTTCCTCCCCAAGGGGAATATTTCGTCCAACTGTTCTGTTCGTGACTGTGACGTGCTCAGAATCTGTGATTCCACTGTGTAACAATGTAGTTGtagtgtattttttaaaaatcttgctTCTGAACAGACCTTGAAAGAGAATAGTTTAAAATATGTGCACATATTTTATAAATCCAAACTTGTCGAGTATTATCTTTTAAATATATTGCAGCTTTTTCCTGATTTTGGttttttcaaatatgtatttatCCGAGGTCAGTGTGCAATAGCTGATTGAGTCTTGAAATATTGAAAAATTTGCAAGTTTTTCAACAGAAGATGTCGCTTTATGAATATCAATATATacaagtactgtaaaaaaaaaaaaatgagtaacaATTCTACCTGCTGGTGTTTGTGATAACTTGGAGGTGTTGTCCTGACTTTGGCTGCTTTGGATAAAGTGCTACTTTGACCTGTTAAATCCTAATTTCAGTGTACTGGTGTCAAACTGTGCCTGTCATCCGTGTGTTTAATGTGGCATCCATCATGCGATGGACCCGATTTCCGTTCCTTCTCTGTGTCATCCAACCAACGGGATATGAAGCTTTGGGGTGAACGAGAGATTAATATATTGACCCCTTTGCATTGCTTTTTGCGAATTAGCTTTTATTATCGCCTAGTTTTGCTCATGGTACTGTAATTACGCACTAATGGAAGTGCTGctgtattataatgtatttagCATTATAGGAAGTATAATTAACTTCCGTGCACAGATAACAATGATCCGATAGATTAATTATACGGTCGTGTTGctgagaaataaatgaataatatttggaGCAACCAAAATTGTTGATGATAAATGAACAGAGAAACTGTCTCCGTACAAAATGTGCAAAGAGGATTTTGCGTACTTAGCTCCTCAGCCACATGCACTGTGAATGAGCCCAATGTTTctgtcatttgtgtgtgtgaaagagaggaGAAGATGGAAAAAAGAGAGAGCAGCATTATCTTGCCAGGAGACTCTGAAGTGTTTCATCTTCAGCTCTTGTTGAAAACAGAGTGAATGAGTTCCTCTTGTCTAAATAAAAACACTGATCTCCCTG

Function

GO:

id name namespace
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060620-2 Predicted to enable oxidoreductase activity. Orthologous to human DHRSX (dehydrogenase/reductase X-linked).

Ensembl:

ensembl_id ENSDART00000149786

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00000651 lncRNA upstream 1383659 32017437 ~ 32018115 (+) True XLOC_000383
TCONS_00002849 lncRNA upstream 1389396 32011880 ~ 32012378 (+) True XLOC_000381
TCONS_00003083 lncRNA upstream 1389980 32010262 ~ 32011794 (+) True XLOC_000380
TCONS_00000637 lncRNA upstream 1880802 31519239 ~ 31520972 (+) True XLOC_000371
TCONS_00002848 lncRNA upstream 2042455 31356349 ~ 31359319 (+) True XLOC_000370
TCONS_00002850 lncRNA downstream 31870 33517802 ~ 33518823 (+) True XLOC_000394
TCONS_00000683 lncRNA downstream 211409 33697341 ~ 33701916 (+) True XLOC_000399
TCONS_00003084 lncRNA downstream 745671 34231603 ~ 34234056 (+) False XLOC_000404
TCONS_00002851 lncRNA downstream 745806 34231738 ~ 34232127 (+) True XLOC_000404
TCONS_00003085 lncRNA downstream 964727 34450659 ~ 34454447 (+) True XLOC_000408
TCONS_00000667 mRNA upstream 67042 33322555 ~ 33334732 (+) False XLOC_000392
TCONS_00000668 mRNA upstream 69713 33328857 ~ 33332061 (+) True XLOC_000392
TCONS_00000666 mRNA upstream 77298 33322174 ~ 33324476 (+) False XLOC_000392
TCONS_00000665 mRNA upstream 118085 33217911 ~ 33283689 (+) True XLOC_000391
TCONS_00000662 mRNA upstream 608130 32791920 ~ 32793644 (+) True XLOC_000389
TCONS_00000676 mRNA downstream 72623 33558555 ~ 33569245 (+) True XLOC_000395
TCONS_00000677 mRNA downstream 148254 33634186 ~ 33635304 (+) True XLOC_000396
TCONS_00000678 mRNA downstream 161750 33647682 ~ 33663705 (+) True XLOC_000397
TCONS_00000679 mRNA downstream 182304 33668236 ~ 33684216 (+) False XLOC_000398
TCONS_00000680 mRNA downstream 182312 33668244 ~ 33694795 (+) False XLOC_000398
TCONS_00000663 other upstream 185056 33215241 ~ 33216718 (+) False XLOC_000390
TCONS_00000664 other upstream 185691 33215243 ~ 33216083 (+) True XLOC_000390
TCONS_00000661 other upstream 695547 32706109 ~ 32706227 (+) True XLOC_000388
TCONS_00000657 other upstream 887670 32513989 ~ 32514104 (+) True XLOC_000386
TCONS_00000653 other upstream 1336744 32051613 ~ 32065030 (+) False XLOC_000384
TCONS_00000681 other downstream 197299 33683231 ~ 33693904 (+) True XLOC_000398
TCONS_00000684 other downstream 249086 33735018 ~ 33735134 (+) True XLOC_000400
TCONS_00000685 other downstream 481225 33967157 ~ 33967273 (+) True XLOC_000401
TCONS_00000688 other downstream 636948 34122880 ~ 34122972 (+) True XLOC_000403
TCONS_00000695 other downstream 914308 34400240 ~ 34400354 (+) True XLOC_000407

Expression Profile

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