Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026916027.2 |
| length | 1340 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | arl5c |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 7263146 ~ 7267913 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07950 | ARL5B; ADP-ribosylation factor-like protein 5B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU245151 | lncRNA | upstream | 204327 | 7054386 ~ 7058819 (+) | True | G207025 |
| TU245054 | lncRNA | upstream | 260978 | 6930320 ~ 7002168 (+) | True | G206955 |
| TU245037 | lncRNA | upstream | 331760 | 6898842 ~ 6931386 (+) | False | G206942 |
| TU245030 | lncRNA | upstream | 363214 | 6898842 ~ 6899932 (+) | True | G206942 |
| TU245223 | lncRNA | downstream | 26572 | 7294485 ~ 7296973 (+) | True | G207084 |
| TU245258 | lncRNA | downstream | 50114 | 7318027 ~ 7318360 (+) | True | G207111 |
| TU245255 | lncRNA | downstream | 51225 | 7319138 ~ 7321930 (+) | False | spsb3a |
| TU245299 | lncRNA | downstream | 118103 | 7386016 ~ 7388543 (+) | True | G207140 |
| TU245320 | lncRNA | downstream | 172164 | 7440077 ~ 7440281 (+) | True | G207155 |
| XM_026916675.2 | mRNA | upstream | 3283 | 7227343 ~ 7259863 (+) | True | cacnb1 |
| XM_026916677.2 | mRNA | upstream | 3283 | 7227343 ~ 7259863 (+) | False | cacnb1 |
| XM_026916678.2 | mRNA | upstream | 3283 | 7227344 ~ 7259863 (+) | False | cacnb1 |
| XM_026916679.2 | mRNA | upstream | 3283 | 7227344 ~ 7259863 (+) | False | cacnb1 |
| XM_026916680.2 | mRNA | upstream | 3283 | 7240448 ~ 7259863 (+) | False | cacnb1 |
| XM_034310102.1 | mRNA | downstream | 6991 | 7274904 ~ 7290380 (+) | True | lasp1 |
| XM_026916935.2 | mRNA | downstream | 34510 | 7302423 ~ 7305900 (+) | True | atp6v0ca |
| XM_026916977.2 | mRNA | downstream | 41294 | 7309207 ~ 7321965 (+) | True | spsb3a |
| XM_026916980.2 | mRNA | downstream | 41294 | 7309207 ~ 7321965 (+) | False | spsb3a |
| XM_026916978.2 | mRNA | downstream | 41294 | 7309207 ~ 7321965 (+) | False | spsb3a |
| XR_004579327.1 | other | upstream | 147211 | 7108178 ~ 7115935 (+) | False | LOC113528597 |
| XR_003402939.2 | other | upstream | 166467 | 7084441 ~ 7096679 (+) | False | eftud2 |
| TU244415 | other | upstream | 1002289 | 6254468 ~ 6260857 (+) | False | LOC117598831 |
| TU244376 | other | upstream | 1068182 | 6190165 ~ 6194964 (+) | True | ypel3 |
| XR_004579365.1 | other | upstream | 1087780 | 6160334 ~ 6175366 (+) | False | mapk3 |
| trnac-gca_18 | other | downstream | 4547 | 7272460 ~ 7272531 (+) | True | trnac-gca_18 |
| trnac-gca_21 | other | downstream | 31700 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| TU245701 | other | downstream | 585278 | 7853191 ~ 7853509 (+) | True | G207480 |
| trnas-cga_1 | other | downstream | 740273 | 8008186 ~ 8008267 (+) | False | trnas-cga_1 |
| XR_003402909.1 | other | downstream | 1628705 | 8896618 ~ 8902677 (+) | True | LOC113528069 |
