Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026916203.2 |
| length | 672 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC113527991 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 10415901 ~ 10417915 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU247529 | lncRNA | downstream | 73679 | 10341911 ~ 10342222 (-) | True | G208951 |
| TU247314 | lncRNA | downstream | 125016 | 10221710 ~ 10290885 (-) | True | G208771 |
| TU247295 | lncRNA | downstream | 228649 | 10187036 ~ 10187252 (-) | True | G208758 |
| TU247174 | lncRNA | downstream | 349545 | 10063977 ~ 10066356 (-) | True | G208649 |
| TU247137 | lncRNA | downstream | 498372 | 9914907 ~ 9917529 (-) | True | G208613 |
| TU247554 | lncRNA | upstream | 29821 | 10447736 ~ 10450540 (-) | True | G208964 |
| TU247571 | lncRNA | upstream | 100427 | 10518342 ~ 10518947 (-) | True | G208980 |
| TU247589 | lncRNA | upstream | 215620 | 10633535 ~ 10634150 (-) | True | G208998 |
| TU247803 | lncRNA | upstream | 671098 | 11089013 ~ 11144984 (-) | True | G209189 |
| XR_003402938.2 | lncRNA | upstream | 800744 | 11218659 ~ 11221378 (-) | True | LOC113528410 |
| XM_026916202.2 | mRNA | downstream | 1133 | 10413005 ~ 10414768 (-) | True | pvalb4 |
| XM_026916204.2 | mRNA | downstream | 8821 | 10403780 ~ 10407080 (-) | True | pvalb8 |
| XM_026916003.2 | mRNA | downstream | 31594 | 10381193 ~ 10384307 (-) | False | aimp2 |
| XM_026916002.2 | mRNA | downstream | 31595 | 10381193 ~ 10384306 (-) | True | aimp2 |
| XM_026916162.2 | mRNA | downstream | 42846 | 10360186 ~ 10373055 (-) | True | cacng4b |
| XM_026916206.2 | mRNA | upstream | 2125 | 10420040 ~ 10427228 (-) | False | pvalb5 |
| XM_034309978.1 | mRNA | upstream | 2125 | 10420040 ~ 10427228 (-) | True | pvalb5 |
| XM_026916200.2 | mRNA | upstream | 32809 | 10450724 ~ 10470514 (-) | True | tecpr1b |
| XM_034309977.1 | mRNA | upstream | 33357 | 10451272 ~ 10470516 (-) | False | tecpr1b |
| XM_034309976.1 | mRNA | upstream | 33357 | 10451272 ~ 10470515 (-) | False | tecpr1b |
| trnac-gca_22 | other | downstream | 30781 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| XR_004579397.1 | other | downstream | 684651 | 9730842 ~ 9731250 (-) | False | hoxb8a |
| XR_004579423.1 | other | downstream | 941423 | 9466480 ~ 9474478 (-) | False | copz2 |
| TU246806 | other | downstream | 996317 | 9409804 ~ 9419584 (-) | False | prr15la |
| XR_003402902.2 | other | upstream | 33581 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| XR_003402978.2 | other | upstream | 1014595 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402963.1 | other | upstream | 1118645 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| XR_003402973.1 | other | upstream | 1148095 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| TU248329 | other | upstream | 1281991 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
