Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026916236.2 |
| length | 4306 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 12 |
| gene id | axin2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 15343257 ~ 15372183 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0043547 | positive regulation of GTPase activity | biological_process |
| GO:0090244 | Wnt signaling pathway involved in somitogenesis | biological_process |
| GO:0038032 | termination of G protein-coupled receptor signaling pathway | biological_process |
| GO:0008219 | cell death | biological_process |
| GO:0090090 | negative regulation of canonical Wnt signaling pathway | biological_process |
| GO:0071407 | cellular response to organic cyclic compound | biological_process |
| GO:0009950 | dorsal/ventral axis specification | biological_process |
| GO:0045668 | negative regulation of osteoblast differentiation | biological_process |
| GO:0001957 | intramembranous ossification | biological_process |
| GO:0005881 | cytoplasmic microtubule | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005938 | cell cortex | cellular_component |
| GO:0014069 | postsynaptic density | cellular_component |
| GO:0005096 | GTPase activator activity | molecular_function |
| GO:0070016 | armadillo repeat domain binding | molecular_function |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| GO:0019901 | protein kinase binding | molecular_function |
| GO:0008013 | beta-catenin binding | molecular_function |
| id | description |
|---|---|
| K04385 | AXIN2; axin 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579350.1 | lncRNA | upstream | 138599 | 15203522 ~ 15204658 (+) | True | LOC117598819 |
| TU250383 | lncRNA | upstream | 332606 | 15010142 ~ 15010651 (+) | True | G211338 |
| TU250374 | lncRNA | upstream | 351807 | 14988144 ~ 14991450 (+) | False | LOC117598752 |
| TU250373 | lncRNA | upstream | 351854 | 14988144 ~ 14991403 (+) | False | LOC117598752 |
| TU250602 | lncRNA | downstream | 97366 | 15469549 ~ 15471704 (+) | True | G211540 |
| TU250605 | lncRNA | downstream | 114354 | 15486537 ~ 15488982 (+) | True | G211543 |
| TU250935 | lncRNA | downstream | 333566 | 15705749 ~ 15706001 (+) | True | G211838 |
| TU250953 | lncRNA | downstream | 467589 | 15839772 ~ 15840000 (+) | True | G211856 |
| TU251141 | lncRNA | downstream | 774196 | 16146379 ~ 16148542 (+) | True | G212033 |
| XM_026916234.2 | mRNA | upstream | 310 | 15208106 ~ 15342947 (+) | True | cep112 |
| XM_034310109.1 | mRNA | upstream | 310 | 15209139 ~ 15342947 (+) | False | cep112 |
| XM_034310115.1 | mRNA | upstream | 310 | 15209139 ~ 15342947 (+) | False | cep112 |
| XM_034310110.1 | mRNA | upstream | 310 | 15209139 ~ 15342947 (+) | False | cep112 |
| XM_034310111.1 | mRNA | upstream | 310 | 15209139 ~ 15342947 (+) | False | cep112 |
| XM_034310300.1 | mRNA | downstream | 65208 | 15437391 ~ 15469406 (+) | True | tex2 |
| XM_034310301.1 | mRNA | downstream | 73472 | 15445655 ~ 15469406 (+) | False | tex2 |
| XM_026916617.2 | mRNA | downstream | 100683 | 15472866 ~ 15501425 (+) | True | LOC113528209 |
| XM_026916402.2 | mRNA | downstream | 137744 | 15509927 ~ 15520567 (+) | True | samd9l |
| XM_026917304.2 | mRNA | downstream | 150910 | 15523093 ~ 15534280 (+) | True | mafga |
| XR_004579399.1 | other | upstream | 1850407 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| XR_003402925.2 | other | upstream | 3154668 | 12158706 ~ 12188589 (+) | False | arhgap17b |
| XR_004579334.1 | other | upstream | 3765434 | 11567119 ~ 11577823 (+) | False | luc7l3 |
| XR_003402977.1 | other | upstream | 3806092 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
| TU247339 | other | upstream | 4925376 | 10412984 ~ 10417881 (+) | True | G208781 |
| trnar-ucu_8 | other | downstream | 441059 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU251011 | other | downstream | 546034 | 15918217 ~ 15968759 (+) | True | G211913 |
| TU251142 | other | downstream | 768147 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251743 | other | downstream | 1715108 | 17087291 ~ 17109275 (+) | False | srl |
| XR_004579361.1 | other | downstream | 2811836 | 18184019 ~ 18341937 (+) | True | LOC113528485 |
