Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034309838.1 |
| length | 870 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 6 |
| gene id | zgc:193811 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 3868579 ~ 3879880 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU242898 | lncRNA | downstream | 97655 | 3768855 ~ 3776450 (-) | False | kcnc3a |
| TU242900 | lncRNA | downstream | 97655 | 3768855 ~ 3776450 (-) | False | kcnc3a |
| TU242874 | lncRNA | downstream | 135146 | 3704283 ~ 3738959 (-) | True | G205063 |
| TU242844 | lncRNA | downstream | 242722 | 3630694 ~ 3631383 (-) | True | G205040 |
| TU242834 | lncRNA | downstream | 253986 | 3617171 ~ 3620119 (-) | True | G205030 |
| TU242970 | lncRNA | upstream | 68969 | 3948849 ~ 3957710 (-) | False | G205145 |
| TU242972 | lncRNA | upstream | 68969 | 3948849 ~ 3957710 (-) | True | G205145 |
| TU242974 | lncRNA | upstream | 68969 | 3948849 ~ 3957710 (-) | False | G205145 |
| XR_004579371.1 | lncRNA | upstream | 110526 | 3990406 ~ 3990917 (-) | True | LOC117598833 |
| TU243002 | lncRNA | upstream | 154016 | 4033896 ~ 4035077 (-) | True | G205169 |
| XM_034309832.1 | mRNA | downstream | 8256 | 3792584 ~ 3865849 (-) | False | kcnc3a |
| XM_034309831.1 | mRNA | downstream | 8256 | 3792584 ~ 3865849 (-) | False | kcnc3a |
| XM_026916270.2 | mRNA | downstream | 8258 | 3783563 ~ 3865847 (-) | False | kcnc3a |
| XM_034309839.1 | mRNA | upstream | 2248 | 3882128 ~ 3888471 (-) | True | lin7b |
| XM_026916866.2 | mRNA | upstream | 11294 | 3891174 ~ 3901444 (-) | True | snrnp70 |
| XM_034310039.1 | mRNA | upstream | 24907 | 3904787 ~ 3907427 (-) | True | pex11a |
| XM_034310036.1 | mRNA | upstream | 37792 | 3917672 ~ 3932820 (-) | False | strada |
| XM_026916870.2 | mRNA | upstream | 37792 | 3917672 ~ 3932820 (-) | False | strada |
| XR_004579380.1 | other | downstream | 460338 | 3382831 ~ 3413767 (-) | False | nde1 |
| XR_004579378.1 | other | downstream | 460338 | 3399745 ~ 3413767 (-) | False | nde1 |
| XR_004579379.1 | other | downstream | 460338 | 3399745 ~ 3413767 (-) | False | nde1 |
| XR_003402972.1 | other | downstream | 717396 | 3156617 ~ 3156709 (-) | True | LOC113528657 |
| XR_003402970.1 | other | downstream | 718675 | 3155296 ~ 3155430 (-) | True | LOC113528655 |
| TU243007 | other | upstream | 160601 | 4040481 ~ 4044575 (-) | True | G205173 |
| XR_004579349.1 | other | upstream | 213033 | 4092913 ~ 4117643 (-) | False | dcaf7 |
| XR_004579368.1 | other | upstream | 842537 | 4722417 ~ 4734886 (-) | False | mlx |
| TU243400 | other | upstream | 848214 | 4728094 ~ 4734805 (-) | False | mlx |
| TU243535 | other | upstream | 1209456 | 5089336 ~ 5091922 (-) | False | G205633 |
