Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026916920.2 |
| length | 1023 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 7 |
| gene id | emc10 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 1816311 ~ 1826068 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0072546 | endoplasmic reticulum membrane protein complex | cellular_component |
| id | description |
|---|---|
| K23570 | EMC10; ER membrane protein complex subunit 10 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241234 | lncRNA | upstream | 249682 | 1565356 ~ 1566629 (+) | True | G203672 |
| TU241224 | lncRNA | upstream | 283266 | 1522226 ~ 1533045 (+) | True | G203662 |
| TU241222 | lncRNA | upstream | 315518 | 1446989 ~ 1500793 (+) | True | G203660 |
| TU241208 | lncRNA | upstream | 375296 | 1362383 ~ 1441015 (+) | True | G203647 |
| TU241190 | lncRNA | upstream | 503322 | 1309397 ~ 1312989 (+) | True | G203635 |
| TU241458 | lncRNA | downstream | 14270 | 1840338 ~ 1842580 (+) | True | G203867 |
| TU241499 | lncRNA | downstream | 30355 | 1856423 ~ 1871560 (+) | True | G203898 |
| TU241508 | lncRNA | downstream | 79771 | 1905839 ~ 1922479 (+) | True | G203906 |
| TU241496 | lncRNA | downstream | 91137 | 1917205 ~ 1940770 (+) | False | ppfia3 |
| TU241516 | lncRNA | downstream | 92955 | 1919023 ~ 1987215 (+) | True | G203913 |
| XM_026916127.2 | mRNA | upstream | 92513 | 1678312 ~ 1723798 (+) | True | lrrc4ba |
| XM_034309684.1 | mRNA | upstream | 92513 | 1678322 ~ 1723798 (+) | False | lrrc4ba |
| XM_034310285.1 | mRNA | upstream | 158015 | 1631072 ~ 1658296 (+) | True | med25 |
| XM_034310286.1 | mRNA | upstream | 158229 | 1631072 ~ 1658082 (+) | False | med25 |
| XM_034310287.1 | mRNA | upstream | 158229 | 1631072 ~ 1658082 (+) | False | med25 |
| XM_026917152.2 | mRNA | downstream | 2603 | 1828671 ~ 1839338 (+) | True | zgc:195001 |
| XM_034310013.1 | mRNA | downstream | 28674 | 1854742 ~ 1870170 (+) | True | tbc1d17 |
| XM_034310014.1 | mRNA | downstream | 28674 | 1854742 ~ 1870170 (+) | False | tbc1d17 |
| XM_034310016.1 | mRNA | downstream | 29521 | 1855589 ~ 1870170 (+) | False | tbc1d17 |
| XM_034310015.1 | mRNA | downstream | 29521 | 1855589 ~ 1870170 (+) | False | tbc1d17 |
| TU241220 | other | upstream | 225236 | 1561594 ~ 1591075 (+) | False | syt3 |
| TU241205 | other | upstream | 459984 | 1353334 ~ 1356327 (+) | False | kmt5c |
| TU240880 | other | upstream | 579699 | 1220512 ~ 1236612 (+) | False | paqr4a |
| TU240783 | other | upstream | 765172 | 1046805 ~ 1051139 (+) | False | armc5 |
| TU240808 | other | upstream | 1058253 | 753275 ~ 758058 (+) | False | fus |
| TU241504 | other | downstream | 57007 | 1883075 ~ 1885478 (+) | False | ccndx |
| XR_004579364.1 | other | downstream | 329531 | 2155599 ~ 2155849 (+) | True | LOC117598829 |
| TU242114 | other | downstream | 1177604 | 3003672 ~ 3012859 (+) | False | pyya |
| TU242330 | other | downstream | 1366644 | 3192712 ~ 3200133 (+) | False | LOC113527909 |
| TU242670 | other | downstream | 2140690 | 3966758 ~ 3986284 (+) | True | limd2 |
