Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579423.1 |
| length | 771 |
| RNA type | misc_RNA |
| GC content | 0.48 |
| exon number | 9 |
| gene id | copz2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 9464331 ~ 9474478 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579419.1 | lncRNA | downstream | 20376 | 9441986 ~ 9446104 (-) | False | LOC117598997 |
| XR_004579418.1 | lncRNA | downstream | 20430 | 9441986 ~ 9446050 (-) | True | LOC117598997 |
| TU246658 | lncRNA | downstream | 342599 | 9122196 ~ 9123881 (-) | False | LOC113527952 |
| TU246570 | lncRNA | downstream | 363354 | 9102911 ~ 9103126 (-) | True | G208189 |
| TU246536 | lncRNA | downstream | 402973 | 9061580 ~ 9063507 (-) | True | G208158 |
| TU246838 | lncRNA | upstream | 20145 | 9494623 ~ 9505750 (-) | True | G208391 |
| TU246919 | lncRNA | upstream | 255391 | 9729869 ~ 9731447 (-) | False | hoxb8a |
| TU246954 | lncRNA | upstream | 272018 | 9746496 ~ 9748039 (-) | True | G208473 |
| XR_004579453.1 | lncRNA | upstream | 355149 | 9829627 ~ 9844421 (-) | False | LOC117599011 |
| XR_004579454.1 | lncRNA | upstream | 355149 | 9829627 ~ 9843423 (-) | False | LOC117599011 |
| XM_026916595.1 | mRNA | downstream | 51451 | 9414691 ~ 9415029 (-) | False | prr15la |
| XM_034310057.1 | mRNA | downstream | 53870 | 9401685 ~ 9412610 (-) | True | LOC113528600 |
| XM_026917248.2 | mRNA | downstream | 57819 | 9401685 ~ 9408661 (-) | False | LOC113528600 |
| XM_034309943.1 | mRNA | downstream | 75120 | 9380674 ~ 9391360 (-) | True | adsl |
| XM_034309942.1 | mRNA | downstream | 75730 | 9380674 ~ 9390750 (-) | False | adsl |
| XM_034309695.1 | mRNA | upstream | 15870 | 9490348 ~ 9501580 (-) | True | cbx1a |
| XM_026916348.2 | mRNA | upstream | 15870 | 9490348 ~ 9501577 (-) | False | cbx1a |
| XM_026916891.2 | mRNA | upstream | 179965 | 9654443 ~ 9658406 (-) | True | hoxb1a |
| XM_026916890.2 | mRNA | upstream | 179965 | 9654443 ~ 9656978 (-) | False | hoxb1a |
| XM_026917239.2 | mRNA | upstream | 195131 | 9669609 ~ 9673077 (-) | True | hoxb2a |
| TU246802 | other | downstream | 46896 | 9409804 ~ 9419584 (-) | False | prr15la |
| TU246803 | other | downstream | 46896 | 9409804 ~ 9419584 (-) | False | prr15la |
| TU246806 | other | downstream | 46896 | 9409804 ~ 9419584 (-) | False | prr15la |
| TU246804 | other | downstream | 46896 | 9413601 ~ 9419584 (-) | True | prr15la |
| TU246677 | other | downstream | 262840 | 9196496 ~ 9203640 (-) | False | dnal4a |
| XR_004579397.1 | other | upstream | 256364 | 9730842 ~ 9731250 (-) | False | hoxb8a |
| trnac-gca_22 | other | upstream | 910571 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| XR_003402902.2 | other | upstream | 977018 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| XR_003402978.2 | other | upstream | 1958032 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402963.1 | other | upstream | 2062082 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
