Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026917152.2 |
| length | 855 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 5 |
| gene id | zgc:195001 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 1828671 ~ 1839338 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241477 | lncRNA | upstream | 3378 | 1824978 ~ 1825293 (+) | True | G203885 |
| TU241234 | lncRNA | upstream | 262042 | 1565356 ~ 1566629 (+) | True | G203672 |
| TU241224 | lncRNA | upstream | 295626 | 1522226 ~ 1533045 (+) | True | G203662 |
| TU241222 | lncRNA | upstream | 327878 | 1446989 ~ 1500793 (+) | True | G203660 |
| TU241208 | lncRNA | upstream | 387656 | 1362383 ~ 1441015 (+) | True | G203647 |
| TU241458 | lncRNA | downstream | 1000 | 1840338 ~ 1842580 (+) | True | G203867 |
| TU241499 | lncRNA | downstream | 17085 | 1856423 ~ 1871560 (+) | True | G203898 |
| TU241508 | lncRNA | downstream | 66501 | 1905839 ~ 1922479 (+) | True | G203906 |
| TU241496 | lncRNA | downstream | 77867 | 1917205 ~ 1940770 (+) | False | ppfia3 |
| TU241516 | lncRNA | downstream | 79685 | 1919023 ~ 1987215 (+) | True | G203913 |
| XM_026916920.2 | mRNA | upstream | 2603 | 1816311 ~ 1826068 (+) | True | emc10 |
| XM_026916921.2 | mRNA | upstream | 2766 | 1816311 ~ 1825905 (+) | False | emc10 |
| XM_026916127.2 | mRNA | upstream | 104873 | 1678312 ~ 1723798 (+) | True | lrrc4ba |
| XM_034309684.1 | mRNA | upstream | 104873 | 1678322 ~ 1723798 (+) | False | lrrc4ba |
| XM_034310285.1 | mRNA | upstream | 170375 | 1631072 ~ 1658296 (+) | True | med25 |
| XM_034310013.1 | mRNA | downstream | 15404 | 1854742 ~ 1870170 (+) | True | tbc1d17 |
| XM_034310014.1 | mRNA | downstream | 15404 | 1854742 ~ 1870170 (+) | False | tbc1d17 |
| XM_034310016.1 | mRNA | downstream | 16251 | 1855589 ~ 1870170 (+) | False | tbc1d17 |
| XM_034310015.1 | mRNA | downstream | 16251 | 1855589 ~ 1870170 (+) | False | tbc1d17 |
| XM_034310056.1 | mRNA | downstream | 43714 | 1883052 ~ 1889515 (+) | True | ccndx |
| TU241220 | other | upstream | 237596 | 1561594 ~ 1591075 (+) | False | syt3 |
| TU241205 | other | upstream | 472344 | 1353334 ~ 1356327 (+) | False | kmt5c |
| TU240880 | other | upstream | 592059 | 1220512 ~ 1236612 (+) | False | paqr4a |
| TU240783 | other | upstream | 777532 | 1046805 ~ 1051139 (+) | False | armc5 |
| TU240808 | other | upstream | 1070613 | 753275 ~ 758058 (+) | False | fus |
| TU241504 | other | downstream | 43737 | 1883075 ~ 1885478 (+) | False | ccndx |
| XR_004579364.1 | other | downstream | 316261 | 2155599 ~ 2155849 (+) | True | LOC117598829 |
| TU242114 | other | downstream | 1164334 | 3003672 ~ 3012859 (+) | False | pyya |
| TU242330 | other | downstream | 1353374 | 3192712 ~ 3200133 (+) | False | LOC113527909 |
| TU242670 | other | downstream | 2127420 | 3966758 ~ 3986284 (+) | True | limd2 |
