Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034309762.1 |
| length | 704 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 4 |
| gene id | elob |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 1021926 ~ 1034215 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | biological_process |
| GO:0019901 | protein kinase binding | molecular_function |
| id | description |
|---|---|
| K03873 | ELOB, TCEB2; elongin-B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU240833 | lncRNA | upstream | 137560 | 817391 ~ 884366 (+) | True | G203357 |
| TU240820 | lncRNA | upstream | 215581 | 805200 ~ 806345 (+) | False | setd1a |
| TU240822 | lncRNA | upstream | 216071 | 805200 ~ 805855 (+) | False | setd1a |
| TU240807 | lncRNA | upstream | 247902 | 771771 ~ 774024 (+) | False | fus |
| TU240804 | lncRNA | upstream | 278186 | 741832 ~ 743740 (+) | True | G203339 |
| TU240787 | lncRNA | downstream | 24464 | 1058679 ~ 1060521 (+) | True | G203327 |
| XR_004579335.1 | lncRNA | downstream | 26975 | 1061190 ~ 1078426 (+) | True | LOC117598762 |
| TU240861 | lncRNA | downstream | 76314 | 1110529 ~ 1110847 (+) | True | G203385 |
| TU241190 | lncRNA | downstream | 275182 | 1309397 ~ 1312989 (+) | True | G203635 |
| TU241208 | lncRNA | downstream | 328168 | 1362383 ~ 1441015 (+) | True | G203647 |
| XM_034309756.1 | mRNA | upstream | 7181 | 1000089 ~ 1014745 (+) | True | arl6ip1 |
| XM_034310159.1 | mRNA | upstream | 24241 | 941020 ~ 997685 (+) | True | smg1 |
| XM_034309735.1 | mRNA | upstream | 110016 | 889261 ~ 911910 (+) | True | syt17 |
| XM_026915992.2 | mRNA | upstream | 139284 | 865213 ~ 882642 (+) | True | LOC113527857 |
| XM_034309745.1 | mRNA | upstream | 172046 | 818661 ~ 849880 (+) | False | hsd3b7 |
| XM_034309708.1 | mRNA | downstream | 121 | 1034336 ~ 1056334 (+) | False | armc5 |
| XM_026916384.2 | mRNA | downstream | 2936 | 1037151 ~ 1042450 (+) | False | LOC113528077 |
| XM_026916385.2 | mRNA | downstream | 2936 | 1037151 ~ 1042450 (+) | False | LOC113528077 |
| XM_034309736.1 | mRNA | downstream | 2936 | 1037151 ~ 1042450 (+) | False | LOC113528077 |
| XM_026916386.2 | mRNA | downstream | 2959 | 1037174 ~ 1042450 (+) | False | LOC113528077 |
| TU240808 | other | upstream | 263868 | 753275 ~ 758058 (+) | False | fus |
| TU240780 | other | upstream | 289072 | 726807 ~ 732854 (+) | False | si:dkey-16l2.17 |
| TU240792 | other | upstream | 311483 | 707774 ~ 710443 (+) | False | rnf25 |
| TU240776 | other | upstream | 345087 | 672224 ~ 676839 (+) | False | thoc6 |
| TU240520 | other | upstream | 494306 | 524812 ~ 527620 (+) | False | LOC117598976 |
| TU240783 | other | downstream | 12590 | 1046805 ~ 1051139 (+) | False | armc5 |
| TU240880 | other | downstream | 186297 | 1220512 ~ 1236612 (+) | False | paqr4a |
| TU241205 | other | downstream | 319119 | 1353334 ~ 1356327 (+) | False | kmt5c |
| TU241220 | other | downstream | 527379 | 1561594 ~ 1591075 (+) | False | syt3 |
| TU241504 | other | downstream | 848860 | 1883075 ~ 1885478 (+) | False | ccndx |
