Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034309798.1 |
| length | 939 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 4 |
| gene id | LOC113528015 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 11023672 ~ 11025804 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU247589 | lncRNA | downstream | 389522 | 10633535 ~ 10634150 (-) | True | G208998 |
| TU247571 | lncRNA | downstream | 504725 | 10518342 ~ 10518947 (-) | True | G208980 |
| TU247554 | lncRNA | downstream | 573132 | 10447736 ~ 10450540 (-) | True | G208964 |
| TU247529 | lncRNA | downstream | 681450 | 10341911 ~ 10342222 (-) | True | G208951 |
| TU247314 | lncRNA | downstream | 732787 | 10221710 ~ 10290885 (-) | True | G208771 |
| TU247803 | lncRNA | upstream | 63209 | 11089013 ~ 11144984 (-) | True | G209189 |
| XR_003402938.2 | lncRNA | upstream | 192855 | 11218659 ~ 11221378 (-) | True | LOC113528410 |
| TU248077 | lncRNA | upstream | 192864 | 11218668 ~ 11221366 (-) | False | LOC113528410 |
| TU248181 | lncRNA | upstream | 363156 | 11388960 ~ 11389231 (-) | True | G209529 |
| TU248190 | lncRNA | upstream | 374918 | 11400722 ~ 11401423 (-) | True | G209538 |
| XM_026916997.2 | mRNA | downstream | 12122 | 11009287 ~ 11011550 (-) | True | rcvrna |
| XM_026916800.2 | mRNA | downstream | 60832 | 10943238 ~ 10962840 (-) | True | tbl3 |
| XM_026916143.2 | mRNA | downstream | 125132 | 10872034 ~ 10898540 (-) | False | LOC113527942 |
| XM_026916142.2 | mRNA | downstream | 125132 | 10872034 ~ 10898540 (-) | False | LOC113527942 |
| XM_026916141.2 | mRNA | downstream | 125132 | 10872034 ~ 10898540 (-) | True | LOC113527942 |
| XM_034310022.1 | mRNA | upstream | 48713 | 11074517 ~ 11145832 (-) | True | baiap2a |
| XM_026916572.2 | mRNA | upstream | 48713 | 11074517 ~ 11145831 (-) | False | baiap2a |
| XM_026916568.2 | mRNA | upstream | 48713 | 11074517 ~ 11145830 (-) | False | baiap2a |
| XM_026916570.2 | mRNA | upstream | 48713 | 11074517 ~ 11145828 (-) | False | baiap2a |
| XM_026916571.2 | mRNA | upstream | 48713 | 11074517 ~ 11145823 (-) | False | baiap2a |
| XR_003402902.2 | other | downstream | 553154 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| trnac-gca_22 | other | downstream | 638552 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| XR_004579397.1 | other | downstream | 1292422 | 9730842 ~ 9731250 (-) | False | hoxb8a |
| XR_004579423.1 | other | downstream | 1549194 | 9466480 ~ 9474478 (-) | False | copz2 |
| TU246804 | other | downstream | 1604088 | 9413601 ~ 9419584 (-) | True | prr15la |
| XR_003402978.2 | other | upstream | 406706 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402963.1 | other | upstream | 510756 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| XR_003402973.1 | other | upstream | 540206 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| TU248329 | other | upstream | 674102 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
| XR_003402968.1 | other | upstream | 730021 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
