Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034310096.1 |
| length | 968 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC117598847 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 170845 ~ 171952 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU240368 | lncRNA | upstream | 11912 | 158552 ~ 158933 (+) | True | G203049 |
| TU240359 | lncRNA | upstream | 24128 | 144076 ~ 146717 (+) | True | G203043 |
| TU240360 | lncRNA | upstream | 24292 | 144076 ~ 146553 (+) | False | G203043 |
| TU240279 | lncRNA | upstream | 119770 | 38437 ~ 51075 (+) | True | G202982 |
| TU240282 | lncRNA | upstream | 128828 | 40638 ~ 42017 (+) | True | G202983 |
| TU240381 | lncRNA | downstream | 3481 | 175433 ~ 175991 (+) | True | G203058 |
| TU240383 | lncRNA | downstream | 3481 | 175433 ~ 175991 (+) | False | G203058 |
| TU240438 | lncRNA | downstream | 29998 | 201950 ~ 202805 (+) | False | G203081 |
| TU240439 | lncRNA | downstream | 29998 | 201950 ~ 202805 (+) | False | G203081 |
| TU240466 | lncRNA | downstream | 87239 | 259191 ~ 307393 (+) | True | G203108 |
| XM_026911782.2 | mRNA | upstream | 107439 | 55561 ~ 63406 (+) | True | syt5a |
| XM_026911773.2 | mRNA | upstream | 165063 | 2041 ~ 5782 (+) | True | LOC113525294 |
| XM_034310145.1 | mRNA | downstream | 94928 | 266880 ~ 269916 (+) | False | prl |
| XM_026911433.2 | mRNA | downstream | 109260 | 281212 ~ 286434 (+) | True | LOC113525016 |
| XM_034309955.1 | mRNA | downstream | 109508 | 281460 ~ 286434 (+) | False | LOC113525016 |
| XM_034309959.1 | mRNA | downstream | 125719 | 297671 ~ 332191 (+) | True | ap2a1 |
| XM_034309960.1 | mRNA | downstream | 125720 | 297672 ~ 332191 (+) | False | ap2a1 |
| TU240365 | other | upstream | 7709 | 156620 ~ 163136 (+) | True | G203047 |
| TU240364 | other | upstream | 9733 | 155327 ~ 161112 (+) | True | G203046 |
| TU240433 | other | downstream | 27308 | 199260 ~ 341276 (+) | True | G203077 |
| TU240437 | other | downstream | 29998 | 201950 ~ 202805 (+) | True | G203081 |
| TU240434 | other | downstream | 95627 | 267579 ~ 269820 (+) | False | prl |
| TU240520 | other | downstream | 352860 | 524812 ~ 527620 (+) | False | LOC117598976 |
| TU240776 | other | downstream | 500272 | 672224 ~ 676839 (+) | False | thoc6 |
