Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034310187.1 |
| length | 1012 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | LOC113528196 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 8902728 ~ 8904664 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246318 | lncRNA | upstream | 28436 | 8851803 ~ 8874292 (+) | True | G208004 |
| TU246211 | lncRNA | upstream | 97295 | 8804488 ~ 8805433 (+) | True | G207932 |
| TU246198 | lncRNA | upstream | 130252 | 8754701 ~ 8772476 (+) | False | LOC113528294 |
| TU246433 | lncRNA | downstream | 52596 | 8957260 ~ 8958068 (+) | False | asphd1 |
| TU246445 | lncRNA | downstream | 77363 | 8982027 ~ 8983311 (+) | True | G208105 |
| TU246490 | lncRNA | downstream | 117511 | 9022175 ~ 9022947 (+) | True | G208120 |
| TU246492 | lncRNA | downstream | 122625 | 9027289 ~ 9027537 (+) | True | G208122 |
| TU246494 | lncRNA | downstream | 125007 | 9029671 ~ 9029875 (+) | True | G208124 |
| XM_026916345.2 | mRNA | upstream | 8931 | 8887405 ~ 8893797 (+) | True | LOC113528067 |
| XM_034310049.1 | mRNA | upstream | 19743 | 8876232 ~ 8882985 (+) | True | LOC113528197 |
| XM_034310186.1 | mRNA | upstream | 29263 | 8843197 ~ 8873465 (+) | True | LOC113528198 |
| XM_026917121.2 | mRNA | upstream | 417784 | 8454003 ~ 8484944 (+) | True | LOC113528522 |
| XM_026917167.2 | mRNA | upstream | 544577 | 8311016 ~ 8358151 (+) | True | ngfra |
| XM_034310050.1 | mRNA | downstream | 5006 | 8909670 ~ 8915323 (+) | True | LOC113528195 |
| XM_034310051.1 | mRNA | downstream | 12284 | 8916948 ~ 8921493 (+) | True | LOC117598844 |
| XM_026916737.2 | mRNA | downstream | 45802 | 8950466 ~ 8958100 (+) | False | asphd1 |
| XM_026916740.2 | mRNA | downstream | 48281 | 8952945 ~ 8958100 (+) | False | asphd1 |
| XM_026916739.2 | mRNA | downstream | 48649 | 8953313 ~ 8958100 (+) | False | asphd1 |
| XR_003402909.1 | other | upstream | 51 | 8896618 ~ 8902677 (+) | True | LOC113528069 |
| trnas-cga_1 | other | upstream | 894461 | 8008186 ~ 8008267 (+) | False | trnas-cga_1 |
| TU245701 | other | upstream | 1049219 | 7853191 ~ 7853509 (+) | True | G207480 |
| trnac-gca_21 | other | upstream | 1603044 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| trnac-gca_18 | other | upstream | 1630197 | 7272460 ~ 7272531 (+) | True | trnac-gca_18 |
| TU246534 | other | downstream | 156901 | 9061565 ~ 9063315 (+) | False | nupr1b |
| XR_003402918.2 | other | downstream | 1039642 | 9944306 ~ 9979954 (+) | False | rapgefl1 |
| TU247340 | other | downstream | 1444738 | 10349402 ~ 10417881 (+) | False | G208781 |
| TU247338 | other | downstream | 1467751 | 10372415 ~ 10417881 (+) | False | G208781 |
| TU247339 | other | downstream | 1508320 | 10412984 ~ 10417881 (+) | True | G208781 |
