Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034310238.1 |
| length | 1034 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | LOC117599002 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 7027775 ~ 7033434 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU245054 | lncRNA | upstream | 25607 | 6930320 ~ 7002168 (+) | True | G206955 |
| TU245037 | lncRNA | upstream | 96389 | 6898842 ~ 6931386 (+) | False | G206942 |
| TU245030 | lncRNA | upstream | 127843 | 6898842 ~ 6899932 (+) | True | G206942 |
| TU245032 | lncRNA | upstream | 127843 | 6898842 ~ 6899932 (+) | False | G206942 |
| TU244902 | lncRNA | upstream | 234377 | 6790822 ~ 6793398 (+) | True | G206835 |
| TU245151 | lncRNA | downstream | 21533 | 7054386 ~ 7058819 (+) | True | G207025 |
| TU245223 | lncRNA | downstream | 261632 | 7294485 ~ 7296973 (+) | True | G207084 |
| TU245258 | lncRNA | downstream | 285174 | 7318027 ~ 7318360 (+) | True | G207111 |
| TU245255 | lncRNA | downstream | 286285 | 7319138 ~ 7321930 (+) | False | spsb3a |
| TU245299 | lncRNA | downstream | 353163 | 7386016 ~ 7388543 (+) | True | G207140 |
| XM_026916184.2 | mRNA | upstream | 8134 | 7007148 ~ 7019641 (+) | True | eps8l1a |
| XM_034309690.1 | mRNA | upstream | 8134 | 7007174 ~ 7019641 (+) | False | eps8l1a |
| XM_026916185.2 | mRNA | upstream | 8134 | 7011251 ~ 7019641 (+) | False | eps8l1a |
| XM_034310303.1 | mRNA | upstream | 91235 | 6921699 ~ 6936540 (+) | True | pold1 |
| XM_034310304.1 | mRNA | upstream | 91386 | 6919450 ~ 6936389 (+) | False | pold1 |
| XM_026916950.2 | mRNA | downstream | 51588 | 7084441 ~ 7102215 (+) | True | eftud2 |
| XM_026917244.2 | mRNA | downstream | 75346 | 7108199 ~ 7131967 (+) | True | LOC113528597 |
| XM_026917243.2 | mRNA | downstream | 85670 | 7118523 ~ 7131967 (+) | False | LOC113528597 |
| XM_026917242.2 | mRNA | downstream | 90413 | 7123266 ~ 7131967 (+) | False | LOC113528597 |
| XM_026917245.2 | mRNA | downstream | 91909 | 7124762 ~ 7131967 (+) | False | LOC113528597 |
| TU244415 | other | upstream | 766918 | 6254468 ~ 6260857 (+) | False | LOC117598831 |
| TU244376 | other | upstream | 832811 | 6190165 ~ 6194964 (+) | True | ypel3 |
| XR_004579365.1 | other | upstream | 852409 | 6160334 ~ 6175366 (+) | False | mapk3 |
| TU244359 | other | upstream | 893204 | 6130783 ~ 6134571 (+) | True | si:ch211-198p11.6 |
| XR_003402939.2 | other | downstream | 51588 | 7084441 ~ 7096679 (+) | False | eftud2 |
| XR_004579327.1 | other | downstream | 75325 | 7108178 ~ 7115935 (+) | False | LOC113528597 |
| trnac-gca_18 | other | downstream | 239607 | 7272460 ~ 7272531 (+) | True | trnac-gca_18 |
| trnac-gca_21 | other | downstream | 266760 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| TU245701 | other | downstream | 820338 | 7853191 ~ 7853509 (+) | True | G207480 |
