Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034310304.1 |
| length | 3370 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 27 |
| gene id | pold1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 6919007 ~ 6936540 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0000084 | mitotic S phase | biological_process |
| GO:0090305 | nucleic acid phosphodiester bond hydrolysis | biological_process |
| GO:0007346 | regulation of mitotic cell cycle | biological_process |
| GO:0043137 | DNA replication, removal of RNA primer | biological_process |
| GO:0019985 | translesion synthesis | biological_process |
| GO:0045004 | DNA replication proofreading | biological_process |
| GO:0006287 | base-excision repair, gap-filling | biological_process |
| GO:0006297 | nucleotide-excision repair, DNA gap filling | biological_process |
| GO:0043625 | delta DNA polymerase complex | cellular_component |
| GO:0008408 | 3'-5' exonuclease activity | molecular_function |
| GO:0003887 | DNA-directed DNA polymerase activity | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU245030 | lncRNA | upstream | 19518 | 6898842 ~ 6899932 (+) | True | G206942 |
| TU245032 | lncRNA | upstream | 19518 | 6898842 ~ 6899932 (+) | False | G206942 |
| TU244902 | lncRNA | upstream | 126052 | 6790822 ~ 6793398 (+) | True | G206835 |
| TU244900 | lncRNA | upstream | 144053 | 6770969 ~ 6775397 (+) | False | G206835 |
| TU244865 | lncRNA | upstream | 183755 | 6734117 ~ 6735695 (+) | True | G206801 |
| TU245151 | lncRNA | downstream | 117997 | 7054386 ~ 7058819 (+) | True | G207025 |
| TU245223 | lncRNA | downstream | 358096 | 7294485 ~ 7296973 (+) | True | G207084 |
| TU245258 | lncRNA | downstream | 381638 | 7318027 ~ 7318360 (+) | True | G207111 |
| TU245255 | lncRNA | downstream | 382749 | 7319138 ~ 7321930 (+) | False | spsb3a |
| TU245299 | lncRNA | downstream | 449627 | 7386016 ~ 7388543 (+) | True | G207140 |
| XM_026917007.2 | mRNA | upstream | 20978 | 6893231 ~ 6898472 (+) | True | aspdh |
| XM_026917256.2 | mRNA | upstream | 573066 | 6343263 ~ 6346384 (+) | True | nkiras2 |
| XM_034309683.1 | mRNA | upstream | 573066 | 6343359 ~ 6346384 (+) | False | nkiras2 |
| XM_026916228.2 | mRNA | upstream | 642739 | 6271135 ~ 6276711 (+) | True | si:ch73-141c7.1 |
| XM_026916971.2 | mRNA | upstream | 651452 | 6264199 ~ 6267998 (+) | True | hsd17b1 |
| XM_026916184.2 | mRNA | downstream | 70759 | 7007148 ~ 7019641 (+) | True | eps8l1a |
| XM_034309690.1 | mRNA | downstream | 70785 | 7007174 ~ 7019641 (+) | False | eps8l1a |
| XM_026916185.2 | mRNA | downstream | 74862 | 7011251 ~ 7019641 (+) | False | eps8l1a |
| XM_034310184.1 | mRNA | downstream | 84082 | 7020471 ~ 7045978 (+) | True | LOC117598990 |
| XM_034310239.1 | mRNA | downstream | 91386 | 7027775 ~ 7033434 (+) | True | LOC117599002 |
| TU244415 | other | upstream | 658593 | 6254468 ~ 6260857 (+) | False | LOC117598831 |
| TU244376 | other | upstream | 724486 | 6190165 ~ 6194964 (+) | True | ypel3 |
| XR_004579365.1 | other | upstream | 744084 | 6160334 ~ 6175366 (+) | False | mapk3 |
| TU244359 | other | upstream | 784879 | 6130783 ~ 6134571 (+) | True | si:ch211-198p11.6 |
| XR_003402939.2 | other | downstream | 148052 | 7084441 ~ 7096679 (+) | False | eftud2 |
| XR_004579327.1 | other | downstream | 171789 | 7108178 ~ 7115935 (+) | False | LOC113528597 |
| trnac-gca_18 | other | downstream | 336071 | 7272460 ~ 7272531 (+) | True | trnac-gca_18 |
| trnac-gca_21 | other | downstream | 363224 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| TU245701 | other | downstream | 916802 | 7853191 ~ 7853509 (+) | True | G207480 |
