Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402969.1 |
| length | 136 |
| RNA type | ncRNA |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC113528654 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 15471777 ~ 15471912 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU250752 | lncRNA | downstream | 127046 | 15344509 ~ 15344731 (-) | True | G211688 |
| TU250420 | lncRNA | downstream | 434882 | 15035169 ~ 15036895 (-) | True | G211363 |
| TU250397 | lncRNA | downstream | 470449 | 15000945 ~ 15001328 (-) | True | G211349 |
| TU250411 | lncRNA | downstream | 488645 | 14978619 ~ 14983132 (-) | True | rac1b |
| TU250394 | lncRNA | downstream | 536656 | 14934669 ~ 14935121 (-) | True | G211346 |
| XR_003402916.2 | lncRNA | upstream | 32 | 15471944 ~ 15472817 (-) | True | LOC113528255 |
| TU250806 | lncRNA | upstream | 36 | 15471948 ~ 15473343 (-) | True | G211737 |
| TU250807 | lncRNA | upstream | 36 | 15471948 ~ 15472816 (-) | False | G211737 |
| TU250824 | lncRNA | upstream | 37785 | 15509697 ~ 15510283 (-) | True | G211751 |
| TU250854 | lncRNA | upstream | 75643 | 15547555 ~ 15547759 (-) | True | G211773 |
| XM_034309829.1 | mRNA | downstream | 268593 | 15053544 ~ 15203184 (-) | True | si:ch73-374l24.1 |
| XM_034309830.1 | mRNA | downstream | 268985 | 15053544 ~ 15202792 (-) | False | si:ch73-374l24.1 |
| XM_026916124.2 | mRNA | downstream | 420134 | 15038370 ~ 15051643 (-) | True | cacng5b |
| XM_026916674.2 | mRNA | downstream | 485665 | 14979625 ~ 14986112 (-) | False | rac1b |
| XM_034310190.1 | mRNA | downstream | 499193 | 14955058 ~ 14972584 (-) | True | LOC113528182 |
| XM_026917092.2 | mRNA | upstream | 106542 | 15578454 ~ 15581065 (-) | True | LOC113528505 |
| XM_034309803.1 | mRNA | upstream | 110692 | 15582604 ~ 15595204 (-) | False | LOC113528397 |
| XM_034309802.1 | mRNA | upstream | 110692 | 15582604 ~ 15595204 (-) | True | LOC113528397 |
| XM_026916317.2 | mRNA | upstream | 135532 | 15607444 ~ 15617384 (-) | True | LOC113528053 |
| XM_034310048.1 | mRNA | upstream | 135533 | 15607445 ~ 15616939 (-) | False | LOC113528053 |
| XR_004579411.1 | other | downstream | 781645 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
| TU250141 | other | downstream | 950802 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579449.1 | other | downstream | 981002 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| XR_003402952.2 | other | downstream | 1442136 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_003402937.2 | other | downstream | 1465265 | 14004169 ~ 14006512 (-) | False | LOC113528401 |
| XR_004579443.1 | other | upstream | 1820939 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579442.1 | other | upstream | 1820939 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579437.1 | other | upstream | 1820939 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579441.1 | other | upstream | 1820939 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
| XR_004579439.1 | other | upstream | 1820939 | 17292851 ~ 17319719 (-) | False | LOC113528519 |
