Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402970.1 |
| length | 135 |
| RNA type | ncRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | LOC113528655 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 3155296 ~ 3155430 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU242266 | lncRNA | downstream | 79608 | 3073977 ~ 3075688 (-) | False | si:dkey-283b1.7 |
| TU242256 | lncRNA | downstream | 115644 | 3034246 ~ 3039652 (-) | True | si:dkey-283b1.6 |
| TU242241 | lncRNA | downstream | 122068 | 3028815 ~ 3033228 (-) | True | G204524 |
| TU242232 | lncRNA | downstream | 184427 | 2965883 ~ 2970869 (-) | True | G204518 |
| TU241989 | lncRNA | downstream | 613771 | 2541126 ~ 2541525 (-) | True | G204317 |
| TU242401 | lncRNA | upstream | 15832 | 3171262 ~ 3174277 (-) | True | G204664 |
| TU242842 | lncRNA | upstream | 445572 | 3601002 ~ 3602239 (-) | True | G205038 |
| TU242834 | lncRNA | upstream | 461741 | 3617171 ~ 3620119 (-) | True | G205030 |
| TU242844 | lncRNA | upstream | 475264 | 3630694 ~ 3631383 (-) | True | G205040 |
| TU242874 | lncRNA | upstream | 548853 | 3704283 ~ 3738959 (-) | True | G205063 |
| XM_034310182.1 | mRNA | downstream | 77278 | 3075532 ~ 3078018 (-) | False | si:dkey-283b1.7 |
| XM_026916303.2 | mRNA | downstream | 77286 | 3074264 ~ 3078010 (-) | True | si:dkey-283b1.7 |
| XM_026916306.2 | mRNA | downstream | 82469 | 3066745 ~ 3072827 (-) | True | rpl23 |
| XM_026917006.2 | mRNA | downstream | 91485 | 3059168 ~ 3063811 (-) | True | ccdc103 |
| XM_026916632.2 | mRNA | downstream | 96340 | 3057417 ~ 3058956 (-) | True | LOC113528219 |
| XM_026917079.2 | mRNA | upstream | 27555 | 3182985 ~ 3191017 (-) | True | rusf1 |
| XM_026917078.2 | mRNA | upstream | 27555 | 3182985 ~ 3190970 (-) | False | rusf1 |
| XM_034309806.1 | mRNA | upstream | 44717 | 3200147 ~ 3213935 (-) | False | prr14 |
| XM_026916799.2 | mRNA | upstream | 44717 | 3200147 ~ 3213935 (-) | True | prr14 |
| XM_026916075.2 | mRNA | upstream | 59056 | 3214486 ~ 3218927 (-) | True | cd2bp2 |
| XR_004579338.1 | other | downstream | 554944 | 2599709 ~ 2600352 (-) | True | LOC117598767 |
| XR_004579451.1 | other | downstream | 1147508 | 2003534 ~ 2007788 (-) | False | LOC113527889 |
| XR_004579450.1 | other | downstream | 1147509 | 2003534 ~ 2007787 (-) | False | LOC113527889 |
| XR_003402974.1 | other | downstream | 1655691 | 1499515 ~ 1499605 (-) | True | LOC113528659 |
| XR_003402975.1 | other | downstream | 1655946 | 1499261 ~ 1499350 (-) | True | LOC113528660 |
| XR_003402972.1 | other | upstream | 1187 | 3156617 ~ 3156709 (-) | True | LOC113528657 |
| XR_004579380.1 | other | upstream | 227401 | 3382831 ~ 3413767 (-) | False | nde1 |
| XR_004579378.1 | other | upstream | 244315 | 3399745 ~ 3413767 (-) | False | nde1 |
| XR_004579379.1 | other | upstream | 244315 | 3399745 ~ 3413767 (-) | False | nde1 |
| TU243007 | other | upstream | 885051 | 4040481 ~ 4044575 (-) | True | G205173 |
