Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402977.1 |
| length | 119 |
| RNA type | rRNA |
| GC content | 0.55 |
| exon number | 1 |
| gene id | LOC113528662 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 11537047 ~ 11537165 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU247909 | lncRNA | upstream | 158247 | 11280080 ~ 11378800 (+) | True | cdc42ep4a |
| TU247679 | lncRNA | upstream | 554754 | 10971980 ~ 10982293 (+) | False | LOC117598771 |
| XR_004579343.1 | lncRNA | upstream | 554957 | 10971721 ~ 10982090 (+) | True | LOC117598771 |
| XR_004579342.1 | lncRNA | upstream | 554969 | 10971721 ~ 10982078 (+) | False | LOC117598771 |
| TU247667 | lncRNA | upstream | 589506 | 10943255 ~ 10947541 (+) | True | G209069 |
| TU248035 | lncRNA | downstream | 80870 | 11618035 ~ 11618234 (+) | True | G209390 |
| TU248037 | lncRNA | downstream | 96747 | 11633912 ~ 11634481 (+) | True | G209392 |
| TU248059 | lncRNA | downstream | 171563 | 11708728 ~ 11708936 (+) | True | G209410 |
| XR_003402931.2 | lncRNA | downstream | 271096 | 11808261 ~ 11822910 (+) | True | LOC113528367 |
| TU248481 | lncRNA | downstream | 482698 | 12019863 ~ 12021132 (+) | True | G209775 |
| XM_026916080.2 | mRNA | upstream | 1355 | 11531521 ~ 11535692 (+) | True | atp5pd |
| XM_026916938.2 | mRNA | upstream | 28258 | 11500895 ~ 11508789 (+) | True | ndel1b |
| XM_026916939.2 | mRNA | upstream | 28258 | 11500903 ~ 11508789 (+) | False | ndel1b |
| XM_026916452.2 | mRNA | upstream | 43165 | 11450559 ~ 11493882 (+) | False | si:ch211-114m9.1 |
| XM_026916441.2 | mRNA | upstream | 43165 | 11450561 ~ 11493882 (+) | False | si:ch211-114m9.1 |
| XM_026916035.2 | mRNA | downstream | 1169 | 11538334 ~ 11560829 (+) | False | unm_sa1261 |
| XM_026916034.2 | mRNA | downstream | 9186 | 11546351 ~ 11560829 (+) | True | unm_sa1261 |
| XM_026917192.2 | mRNA | downstream | 29954 | 11567119 ~ 11577823 (+) | True | luc7l3 |
| XM_026917191.2 | mRNA | downstream | 29955 | 11567120 ~ 11577823 (+) | False | luc7l3 |
| XM_026917186.2 | mRNA | downstream | 41395 | 11578560 ~ 11601412 (+) | True | si:ch73-281f12.4 |
| TU247340 | other | upstream | 1119166 | 10349402 ~ 10417881 (+) | False | G208781 |
| TU247338 | other | upstream | 1119166 | 10372415 ~ 10417881 (+) | False | G208781 |
| TU247339 | other | upstream | 1119166 | 10412984 ~ 10417881 (+) | True | G208781 |
| XR_003402918.2 | other | upstream | 1557093 | 9944306 ~ 9979954 (+) | False | rapgefl1 |
| TU246534 | other | upstream | 2473732 | 9061565 ~ 9063315 (+) | False | nupr1b |
| XR_004579334.1 | other | downstream | 29954 | 11567119 ~ 11577823 (+) | False | luc7l3 |
| XR_003402925.2 | other | downstream | 621541 | 12158706 ~ 12188589 (+) | False | arhgap17b |
| XR_004579399.1 | other | downstream | 1938663 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| trnar-ucu_8 | other | downstream | 4276077 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU251011 | other | downstream | 4381052 | 15918217 ~ 15968759 (+) | True | G211913 |
